Methylomonas sp. LL1: IVG45_20055
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Entry
IVG45_20055 CDS
T07814
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mell
Methylomonas sp. LL1
Pathway
mell03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mell00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IVG45_20055 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mell03021
]
IVG45_20055 (rpoA)
03400 DNA repair and recombination proteins [BR:
mell03400
]
IVG45_20055 (rpoA)
Enzymes [BR:
mell01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IVG45_20055 (rpoA)
Transcription machinery [BR:
mell03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IVG45_20055 (rpoA)
DNA repair and recombination proteins [BR:
mell03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IVG45_20055 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
CbiG-like_linker
Motif
Other DBs
NCBI-ProteinID:
QPK63075
UniProt:
A0A7T0NY95
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All DBs
Position
4280565..4281572
Genome browser
AA seq
335 aa
AA seq
DB search
MQSSIAGLLRPKLVEVVSETPNHSRIVIEPLERGYGHSLGNALRRVMLSSIPGCAVTEVS
IAGVLHEYTTIEGVQEDVIDILLNLKKLSVVLHGKDEVTLTLSKSSIGSVTAGDIETTNL
VDIINPELVIANLTQDKQLDIKIKIERGRGYIPAAVRKEQQDDTPVGVLMVDAAFSPIVK
VAYHVESTRVEQRTNLDKLVIELETNGTVDPEQVIKLAASILHDQLSVFVDFEKVKEQMP
EESVVEEEAFDPILLRPVDDLELTVRSANCLKAENIFYIGDLIQRTEVELLRTPNLGKKS
LTEIKDILAIKGLSLGMRLENWPPENLVDQSQIGI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttccatagcaggtttgttaaggcctaaattagttgaagtagttagtgaaacg
ccaaaccactccagaatcgtaattgagccgctcgagcgtggctatggccattctcttggt
aatgcgcttcggcgtgtaatgctttcctcaattccaggttgtgctgttactgaagtctcc
atagccggtgtacttcatgaatacaccactattgagggtgtccaggaagatgttattgac
atattactgaatctaaaaaagctttcagtagtgttgcatgggaaagatgaagtcacattg
actttgtccaagtcctccattggtagtgtaacagccggtgatattgagacaaccaatctg
gtagatataattaatcccgaattagttattgctaaccttactcaagataagcagcttgac
attaaaattaagatagagcggggtagaggatatattcctgcggcggtccgaaaagagcag
caagatgatactcctgttggggttttgatggtcgatgccgcatttagccctatcgttaaa
gtggcttaccatgttgaatcaacccgtgttgaacagcgaaccaatcttgataagttggta
atcgagttagagactaacggtaccgttgatcctgaacaagttataaaattagccgcatct
atcctgcatgatcagttgtcagtatttgtcgatttcgaaaaagtcaaagaacaaatgcct
gaggaaagcgtggttgaagaagaggcctttgatcctattcttttgaggcctgttgacgat
cttgaattaactgtgcgttccgctaattgtctaaaagcggaaaacattttttatattgga
gatttaattcagcgtaccgaagtagagctgttacggactccaaacttaggaaaaaaatca
ttaaccgagataaaagatatattggcaatcaaaggcttgtccttgggaatgaggcttgaa
aattggccgccagaaaatttggttgatcaatcccaaatcggtatttaa
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