Pulveribacter suum: C7H73_03260
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Entry
C7H73_03260 CDS
T05362
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
melm
Pulveribacter suum
Pathway
melm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
melm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C7H73_03260 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
melm03021
]
C7H73_03260 (rpoC)
03400 DNA repair and recombination proteins [BR:
melm03400
]
C7H73_03260 (rpoC)
Enzymes [BR:
melm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C7H73_03260 (rpoC)
Transcription machinery [BR:
melm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C7H73_03260 (rpoC)
DNA repair and recombination proteins [BR:
melm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C7H73_03260 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AVP56787
UniProt:
A0A2P1NIC6
LinkDB
All DBs
Position
714820..719043
Genome browser
AA seq
1407 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDYDAKRKEYGDEFVAHM
GAEGIKELLEGIDLEIEIERLRGDLTGSEVKVKKNAKRLKVLEAFKKSGIKPEWMIMEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIREHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYHATREKINGKGEGMVFTDILEVQRALDAGEV
ELATKISVRLPDWSRDKDSGEWQSTIGLVQTTVGRALLSEILPKGLAFSNLNKALKKKEI
SRLINASFRQCGLKETVVFADKLLQNGFRLATHAGISISVDDMLVPPQKADILARAEKEV
KEIEQQYVSGLVTAGERYNKVVDIWGKAGDEVSKVMMAQLAKEKTIDRHGKEVEQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTENDCGTSNGSLMRAIVEGGEVVESLRDRVLG
RVTAEEVLHPETREVVTTAGTLLDESTLDGMEAAGVDEVKVRTALTCETRYGLCAHCYGR
DLGRGGMINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGIIGFN
ATMRYVSNTRGELVVIARSGEIIIQDEHGRERERHKVPYGATLTVKADQQIKAGTILANW
DPLTRPIITEFAGQVRFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGATKVVRPQVKLI
DAGGQEVKIPGTDHSVTIGFPVGSLIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRV
AELFEARSPKDKGMLAEITGTVSFGKETKGKVRLQITDPDGKVWDELVPKEKNMLVHEGQ
VVNKGELIVDGPADPQDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVENPGESGYIAGEQVERSEILNTNEALQAADKIPATYSNVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDEAERRA
IADAEAAELASAGEVEIGADMDASAAD
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaagcaattcacgccggacgagcacttcgacgccatc
aagatcggcctggcgtcgcccgagaagatccgctcctggtccttcggcgaggtgaagaag
ccggagacgatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgcgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgaaaaatgcggcgttgaagtcacgcagaccaaggtgcgccgcgag
cgcatgggccacatcgacctggccgcgccctgcgcgcacatctggttcttgaagagcctg
ccctcgcgcctgggcctggtgctggacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaggcctacgtggtcaccgacccgggcatgacgccgctcaagaagttctcgatcatg
agcgaggacgactacgacgccaagcgcaaggagtacggcgacgagttcgtcgcgcacatg
ggcgccgagggcatcaaggagctgctggaaggcatcgacctggagatcgagatcgagcgc
ctgcgcggcgacctgacgggctcggaagtcaaggtcaagaagaacgccaagcgcctgaag
gtgctcgaagcgttcaagaagtcgggcatcaagcccgagtggatgatcatggaagtgctg
cccgtgctgcccccggacctgcgtccgctggtgccgctcgatggcggtcgcttcgccacg
tccgacctgaacgacctgtaccgccgcgtcatcaaccgcaactcgcgcctgcgccgcctg
ctggagctgaaggctccggagatcatcgcgcgcaacgaaaagcgcatgctgcaggaagcc
gtggacagcctgctggacaacggccgccgcggcaaggccatgacgggcgccaacaagcgc
gccctgaagtcgctggccgacatgatcaagggcaagggcgggcgcttccgccagaacctc
ttgggcaagcgcgtggactactcgggccgctcggtcatcaccgtgggcccgacgctcaag
ctgcaccagtgcggcctgcccaagctgatggcgcttgaattgttcaagcccttcatcttc
tcgcgcctggaggcgatgggcatcgccacgaccatcaaggccgccaagaaggaagtcgaa
gccggcacgccggtggtgtgggacatcctggaagaggtgatccgcgagcatccggtgatg
ctcaaccgcgcgcccacgctgcaccgcctagggatccaggcgttcgagcccatcctgatc
gaaggcaaggccatccagctgcacccgctggtctgcgccgccttcaacgccgacttcgac
ggcgaccagatggccgtgcacgtgccgctgtcggtcgaggcgcagctggaggcgcgcacg
ctgatgctggcctccaacaacgtgctgtttcccgcctcgggcgagccctccatcgtgccc
tcgcaggacgtggtgctgggcctgtaccacgccacccgcgagaagatcaacggcaagggc
gaaggcatggtcttcaccgacatccttgaagtccagcgcgcgctggacgcgggcgaggtc
gagctggccaccaagatcagcgtgcgcctgcccgactggagccgggacaaggacagcggc
gagtggcaatccaccatcggcctggtgcagaccaccgtgggccgcgccctgctgtcggag
atcctgcccaagggcctggcgttttccaacctgaacaaggcgctcaagaagaaggaaatc
tcgcgcctgatcaacgcctccttccgccaatgcggcctgaaggagacggtggtgttcgcc
gacaagctgctgcaaaacggctttcgcctggccacgcacgccggcatctccatctcggtg
gatgacatgctggtgccgccgcaaaaggccgacatcctggcccgcgccgaaaaggaagtg
aaggagatcgagcagcagtacgtctcgggcctggtcacggccggcgagcgctacaacaag
gtggtggacatctggggcaaggccggcgacgaagtctccaaggtcatgatggcccagctg
gccaaggaaaagaccatcgaccgccacggcaaggaagtggagcaggagtcgttcaactcc
atctacatgatggccgactcgggcgcgcggggttccgccgcccagatccgccagctggcc
ggcatgcgcggcctgatggccaagcccgacggctccatcatcgagacgcccatcacggcc
aacttccgtgaaggcctgaacgtgctgcagtacttcatctccacgcacggggcccgcaag
ggcctggccgacacggcgctgaagacggccaactccggctacctgacgcgccgcctggtg
gacgtgacgcaggacctggtggtgaccgagaacgactgcggcaccagcaatggctcgctg
atgcgcgccatcgtcgaaggcggcgaagtggtggaatcgctgcgcgaccgcgtgctgggc
cgcgtgacggccgaggaagtgctgcaccccgaaacgcgcgaggtggtgaccacggccggc
acgctgctggacgaaagcaccctggacggcatggaagccgccggcgtggacgaagtgaag
gtgcgcactgccctgacgtgcgagacacgctacggcctgtgcgcccattgctatggccgc
gacctgggccgcggcggcatgatcaacctcggcgaggccgtgggcgtgatcgccgcccag
tccatcggcgagcccggcacgcagctgaccatgcgtaccttccacatcggtggtgcggcg
tcgcgtgcggcggtggcctccagcgtggaagccaagtccaacggcatcatcggcttcaac
gccacgatgcgctacgtgagcaacacccgcggcgagctggtggtgatcgcccgctccggc
gagatcatcatccaggacgagcacggccgcgagcgcgagcgccacaaggtgccctacggc
gccacgctgacggtgaaggccgaccagcagatcaaggccggcaccatcttagccaactgg
gatccgctgacccgcccgatcatcacggagttcgccggccaggtgaggttcgagaacgtc
gaggaaggcctgacggtggccaagcaggtggacgaggtcacgggcctgtccacgctggtg
gtgatcgaccccaagcgccgcggcgccaccaaggtggtgcgcccgcaggtcaagctgatc
gacgccggcggccaggaggtgaagattcctggcaccgaccactcggtgaccatcggcttc
cccgtgggttcgctgatccaggtgcgcgacggtcaggacgtgggccccggcgaggtgctg
gcccgcatcccggtggaaggccagaagacccgcgacatcacgggcggtctgccgcgcgtg
gccgagctgttcgaagcccgcagccccaaggacaagggcatgctggccgagatcaccggc
acggtgtccttcggcaaggagaccaagggcaaggtgcgcctgcagatcaccgacccggat
ggcaaggtctgggacgagctcgtgcccaaggaaaagaacatgctggtccacgagggccag
gtggtcaacaagggcgagctgatcgtggacgggccggccgatccgcaggacatcctgcgc
ctgctgggcatcgaggagctggcgcgctacatcgttgacgaagtgcaggacgtctatcgc
ctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcgc
cgtgtcgtggtcgagaacccgggcgagtccggctacatcgccggcgagcaggtcgagcgc
tcggagatcctcaataccaacgaagcgctgcaggctgcggacaagatccccgcgacctac
tccaacgtgttgctgggcatcaccaaggcctcgctgtccacggactccttcatctccgcc
gcgtcgttccaggaaacgacccgcgtgctcaccgaggctgccatcatgggcaagcgcgac
gagctgcgcggcctgaaggaaaacgtgatcgtcggccgcctcatcccggctggcaccggc
ctggcctaccaccaggcgcgcaaggtcaaggacgccatggacgaggccgagcgccgcgcc
atcgccgacgccgaagccgccgagctggccagtgccggtgaagtggaaatcggcgccgac
atggacgccagcgccgccgactga
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