Pulveribacter suum: C7H73_10130
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Entry
C7H73_10130 CDS
T05362
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
melm
Pulveribacter suum
Pathway
melm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
melm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7H73_10130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
melm03019
]
C7H73_10130
Enzymes [BR:
melm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7H73_10130
Messenger RNA biogenesis [BR:
melm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7H73_10130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AVP57984
UniProt:
A0A2P1NLP2
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All DBs
Position
2206667..2208445
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AA seq
592 aa
AA seq
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MTFDELKLSPAILRAVQEQGYDSPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPLL
QRLEAGNPATSRFGGRGVRALVLTPTRELAAQVEESVRGYGKHLDIKSTVIFGGVGMNPQ
IDRIKRGVDILVATPGRLLDLQQQGFLDLSTVEVLVLDEADRMLDMGFIHDVKKILALLP
SSKQSLLFSATFSDEIRELASGLLKNPQSIQVTPRNTTVQRISQVIHPVGRGKKKQVLLH
IIQQHDWSQVLVFTRTKFGANNVADYLTKNGVTAMALHGNKSQSARTQALEGFKTGQIRA
LVATDIAARGIDIDDLPHVVNYEIPNVSEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMM
DIERFTKQEIPVQVIDGFGPDEGEQAEPIAMGRQTIWGGAGKPPGRDVMQAAAKAARQEM
MERIRTNKAATGAGGGQRGRQGGAEGGQSRKEGAEGGGRGRHGGASAGQGPRPAGRAPQP
QQNAGGARRRSGGGGGGTGGGMAGSGGATGGGQRRHDDSQPRGENAHMLTQTGHSLMPRR
PGGGGQPDPMRTNVDMMAGSGRRGGGYRNGGGGGGGGGGSRGPRGGGGGYGR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgacgaactgaagctctcgccggccattttgcgggccgtgcaggaacagggc
tatgacagccctacccccatccaggcccaggccattcctgccgtgctggcaggccacgac
ctgctggccggcgcgcagaccggcaccggcaagacggccgccttcacgctgcccctgctg
cagcgcctggaagcgggcaaccccgccaccagccgcttcggcggccgcggcgtgcgcgct
ctggtgctgacccccacgcgcgaattggccgcccaggtcgaagaatccgtgcgcggctac
ggcaagcacctggacatcaagtccaccgtgatcttcggcggtgtgggcatgaacccccag
atcgaccgcatcaagcgcggcgtggacatcctggtggcaacgcccgggcgcctgctggac
ctgcagcagcagggcttcctggacctgtccaccgtcgaggtgctggtgctggacgaagcc
gaccgcatgctggacatgggcttcatccacgacgtgaagaagatcctcgccctgctgcct
tcgtccaaacagagcctgctgttttctgccacgttcagcgacgagatccgcgagctggcc
agcggcctgctcaagaacccgcaaagcatccaggtcaccccgcgcaacaccacggtgcag
cgcatcagccaggtcatccacccggtgggccgcggcaagaaaaagcaggtgcttctgcac
atcatccagcagcacgactggagccaggtgctggtgttcacgcgcaccaagttcggtgcc
aacaacgtggccgactacctgaccaagaacggcgtgacggccatggcgctgcacggcaac
aagagccagagcgcccgtacccaggcgctggaaggcttcaagaccggccagatccgcgcc
ctggtggccaccgacattgccgcgcgcggcatcgacatcgacgacctgccgcacgtcgtc
aactacgagatccccaacgtctccgaggactatgtgcaccgcatcggccgcaccggccgc
gccgggcgcgagggccacgccgtgagcctggtctgcatggacgaggaaggcttcatgatg
gacatcgagcgcttcaccaagcaggagattcccgtgcaggtgatcgatggcttcggccct
gacgagggcgagcaggccgagcccatcgccatgggtcgccagaccatctggggcggcgct
ggcaagccaccggggcgcgacgtgatgcaggcggctgccaaggccgcacgccaggagatg
atggagcgcatccgcaccaacaaggcagccacgggcgccgggggtggccagcgcggccgc
caaggtggcgccgaaggcggccagtcccgcaaggaaggcgccgagggcggtggccgcggc
cggcatggcggcgccagcgccggccagggcccccgcccggccggccgcgccccgcagccg
cagcaaaacgcgggcggcgcacgccgccgcagcggtggcggcggtggcggtaccggtggc
ggcatggctggcagcggtggtgctaccggtggtggccagcgtcgtcatgacgacagccag
ccgcgcggcgaaaacgcccacatgctgacccagaccggtcactcgctcatgccccggcgc
cccggtggcggcggccagcccgaccccatgcgcaccaacgtggacatgatggccggcagc
ggccgccgtggcggtggctatcgcaatggcggcggcggcggtggtggtggcggcggctcg
cgcgggccgcgcggcggtggcggcggttacggccgctga
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