Pulveribacter suum: C7H73_10615
Help
Entry
C7H73_10615 CDS
T05362
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
melm
Pulveribacter suum
Brite
KEGG Orthology (KO) [BR:
melm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
melm03019
]
C7H73_10615 (hrpA)
Enzymes [BR:
melm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C7H73_10615 (hrpA)
Messenger RNA biogenesis [BR:
melm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C7H73_10615 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
Helicase_C
OB_NTP_bind
DEAD
HA2_C
AAA_19
AAA_22
WHD_HA2
NACHT
nSTAND3
T2SSE
AAA_23
Cas3-like_C_2
PhoH
SRP54
nSTAND_NTPase5
FtsK_SpoIIIE
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AVP58070
UniProt:
A0A2P1NM15
LinkDB
All DBs
Position
complement(2314736..2318740)
Genome browser
AA seq
1334 aa
AA seq
DB search
MALSITFPENLPVSARREEIMAAIAQHQVVIVCGETGSGKTTQLPKMALALGRGRANAPE
GARGKLIGHTQPRRIAASSVAKRIAQELDTPLGEVVGYKVRFADTLHKGASVKLMTDGIL
LAETQGDPLLLQYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIVTSATIDAERFA
RHFASKEGPAPVIMVSGRTYPVEVRWRPFEERRDFDLQDAIADGVDELWAGGAGGDILVF
LPGEREIREAADHLRKHLQHAPLLRNAEVLPLFSRLSQAEQDRIFEPHGSRRIVLATNVA
ETSLTVPGIRYVIDAGTARVKRYSLRSKVEQLLVEPISQAAANQRAGRCGRVANGICIRL
YDEAGFLQRDAFTDPEILRSSLAGVILRMKSLGLGEVINFPFLQAPSGRAIADGYQLLQE
LGAVDERGQLLATGRELARLPLDPRVGRMIVEGRERGALAEVLIVAAALSVQDVRDRPMD
AQQQADQQHAKFDDEKSEFSGYLRLWQWLHDARGGKQVAHSRREMAAQAATRTAGVPRNL
AVLPVARRQQALAPVQAAPADAGDSHRLSNRQWEQLLRQNFISIRRVREWRDIHSQLLMV
VREHQWPLNTEAAGYEALHLSMLSGLLGNIGFRAEEADAYLGAHGIKFHPHPGAHLSKKP
GRWIVAAEQVETTRLYGRGIAAVEPPWLEQVGAHLLKKQLLEPHWSKKQADVVALERATL
YGLVVYGGRQVSYGRIDPHEARQIFIRQALVQGEWDAPWPFLAANLKLVRKVEELEHKSR
RQDVLVDDELIYAYYDQLLPEGVFSGATFDKWYRVASREQPQLLRLSREELMRHEAAGIT
TDNFPRTVKLGGVDCSASYLHAPGDARDGVTVTVPLFVLNQVSEERAEWLVPGMLKDKIQ
ALLKSLPQRPRSRFVPLPESAARLAQLFTQEGQWAQGSLVDALLKAVRGETSLDVKRADF
KLDMLSPHLFMNLRITDEHGRQLGQGRNLAALKAELGTRARGAFQALASLKIAASADPEP
VTASKRFQKPAGQAPAAIKNEVAAAAPAAQRAEARYTAWSFGELPELMEIRKGSQTLIGF
PALTDQGDAVGIEVFDEPEAAAARHRAGLVRLFALQLRDALKYLEKNVPDLQKMAVAYMP
LGTQEELRAQIIGVALERAFLSEPLPVNEVQFQQRVQEGRARLTLIANEVARQAGVILQE
YAAVQRKLKDTKNARDAVADATQQLQRLMPRTFLAAAPWAQLQHYPRYLKAIVSRLDKLR
TDPARDAARLKELQPLEQRYTRLLAERKGQQDARMQEYRWMLEELRVSFFAQELRTPYPV
STKRLDKVWAQLAS
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtcgatcacctttcccgaaaacctccccgtcagcgcccgccgcgaggaaatc
atggcggccatcgcgcagcaccaggtcgtcatcgtgtgcggcgaaacaggctcgggcaag
accacgcagctgcccaagatggccctggcgctgggccggggccgggccaatgcgcccgaa
ggcgcgcgcggaaagctgatcggccacacccagccgcggcgcattgcggccagcagcgtg
gccaagcgcatcgcccaggagctcgacaccccgctgggcgaggtggtgggctacaaggtg
cgctttgccgacacgctgcacaagggcgcctcggtcaagctgatgaccgacggcatcttg
ctggccgagacgcagggtgacccgctgctgctccagtacgacacgctgatcatcgacgag
gcgcacgagcgcagcctgaacatcgactttttgctgggctacctcaagcagctgctgccc
cggcggccggatctgaaagtcatcgtcacctccgccaccatcgacgccgagcgcttcgcc
aggcatttcgccagcaaagaaggcccggcgccggtcatcatggtctctggccgcacctat
cccgtggaggtgcgctggcggccgttcgaggaaaggcgggacttcgaccttcaagatgcc
atcgccgacggcgtggacgagctgtgggccggtggcgcgggcggcgacatcctggtgttc
ttgcccggcgagcgcgagatccgcgaggccgccgaccacctgcgcaagcacctgcagcac
gcgcccctgctgcgcaatgccgaggtgctgccgctgttctcgcgcctgtcccaggccgag
caggaccgcatcttcgagccgcacggcagccggcgcatcgtgctggccaccaacgtggcc
gagacatcgctcaccgtgcccggcatccgctatgtgatcgacgccggcacggcgcgcgtc
aagcgctattcgctgcgcagcaaggtagagcagctgctggtcgagcccatcagccaggcc
gcagccaaccagcgcgccggccgctgcgggcgcgtggccaacggcatctgcatccggctg
tatgacgaagccggctttttgcagcgcgacgccttcaccgacccggagatcctgcgctcg
tcgctggccggcgtcatcctgcgcatgaagtcgctgggcctgggcgaagtgatcaacttc
cccttcctgcaggcgccctcgggccgggccattgccgacggctaccagctgctgcaggag
ctgggcgccgtggacgagcgcggccagctgctggccaccggccgcgagctggcacgcctg
ccgctggacccgcgcgtgggccgcatgatcgtcgaggggcgcgagcgcggcgccctggcc
gaggtgctgatcgtcgccgccgccctgtcggtgcaggacgtgcgcgaccgcccgatggac
gcccagcagcaggccgaccagcagcacgccaagttcgacgacgagaagagcgaattcagc
ggctacctgcgcctgtggcagtggctgcacgacgcgcgcggcggcaagcaggtggcgcac
agccgccgcgagatggccgcccaggcggccacgcgcactgccggcgtaccgcgcaacctg
gccgtgctgcccgtggcccggcgccagcaggcgcttgcgcccgtgcaggccgcaccggcc
gatgcgggcgacagccaccgcctgagcaaccgccagtgggagcagctgctgcgccagaac
ttcatcagcatccgccgcgtgcgcgagtggcgcgacatccactcgcagctgctcatggtg
gtgcgcgagcaccagtggcccctgaacaccgaggcggcgggctacgaggcgctgcacctg
tccatgctctcgggcctgctgggcaacatcggctttcgcgccgaagaggccgacgcctac
ctgggcgcgcacggcatcaagttccatccgcacccgggcgcgcatctgtccaagaagccc
gggcgctggatcgtcgccgccgagcaggtggagaccacgcgcctgtacggtcgcggcatc
gccgccgtcgagccgccatggctggagcaggtcggcgcccatttgctgaaaaagcagctg
ctggagccgcactggagcaagaagcaggcggacgtggtggcgctggagcgcgccacgctc
tacggcctggtggtctatggcggccggcaggtcagctatggccgcatcgacccgcacgag
gcgcgccagatcttcatccgccaggcgctggtgcagggcgagtgggacgcgccctggccc
ttcctggcggccaacctgaagctggtgcgcaaggtcgaggagctggagcacaagagccgg
cgccaggacgtgctggtggacgacgagttgatctacgcctactacgaccagctgctgccc
gagggcgtgttcagcggcgcgacgttcgacaagtggtaccgcgtggccagccgcgagcag
ccgcaactcttgcgcctgtcgcgcgaggagctgatgcgccacgaggccgcgggcatcacc
accgacaacttcccgcgcaccgtcaagctgggcggcgtggactgcagcgccagctacctg
catgcgcccggcgacgcgcgcgacggcgtcaccgtgacggtgccgctgttcgtgctcaac
caggtcagcgaagagcgtgccgagtggctggtgcccggcatgctcaaggacaagatccag
gcgcttttgaaaagcctgccgcagcgcccgcgcagccgcttcgtgccgctgcctgaaagc
gccgcgcggctggcgcagctgttcacgcaagagggccagtgggcgcaaggcagcctggtg
gacgcgctgctgaaggccgtgcggggcgaaacctcgctggacgtcaagcgtgcggacttc
aagctggacatgctcagcccccacctgttcatgaacttgcgcatcaccgacgagcacggc
cgccagctgggccagggccgcaatctggccgccctgaaggccgaactgggcacccgtgcg
cgcggggccttccaggcgcttgcttcactaaagatagctgccagcgctgatccagagccg
gttacagcatcaaaacgtttccaaaagcccgcgggtcaagcgccagcagctatcaaaaat
gaggttgctgccgctgcccccgctgcgcagcgggccgaggcgcgctacaccgcctggagc
ttcggcgagctgcccgagctgatggaaatccgcaagggcagccagacgctgatcggcttt
cccgcgctgaccgaccagggcgacgcggtcggtatcgaggtctttgacgagcccgaggcg
gccgctgcgcgccaccgggccggcctggtgcgcctgttcgcgctgcagttgcgcgacgcg
ctgaaatatctggaaaaaaacgttcccgatctgcagaagatggccgtggcctacatgccg
ctgggcacgcaggaggagctgcgcgcgcagatcatcggcgtggcgctggagcgcgccttt
ttgtccgagccgctgccggtaaacgaagtgcagtttcagcagcgggtgcaggaaggccgc
gcccggctgacgctcatcgccaatgaggtggcccggcaggccggcgtcatcttgcaggaa
tatgccgccgtgcagcgcaagctcaaggacaccaagaacgcccgcgacgccgtggccgac
gccacccagcagctgcagcgcctgatgccccgcaccttcctggccgcagcgccctgggcg
cagctgcagcactacccgcgctacttgaaggccatcgtcagccgcctggacaagctgcgc
accgacccggcccgcgacgccgcccgcctgaaggagctgcagccgctggagcagcgctac
acgcgcctgctggccgaacgcaagggccagcaggatgcacgtatgcaggaataccgctgg
atgctggaggagctgcgcgtgagctttttcgcgcaggagctgcgcacgccgtacccggta
agcaccaagcggctggacaaggtctgggcgcagctggcttcgtga
DBGET
integrated database retrieval system
