Pulveribacter suum: C7H73_11985
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Entry
C7H73_11985 CDS
T05362
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
melm
Pulveribacter suum
Pathway
melm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
melm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C7H73_11985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
melm03021
]
C7H73_11985
Transcription machinery [BR:
melm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7H73_11985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r2
Sigma70_r3
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
SPO22
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
AVP58313
UniProt:
A0A2P1NMR9
LinkDB
All DBs
Position
2609491..2611935
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AA seq
814 aa
AA seq
DB search
MPAQKSAKSPKSTAAAPAQAKSAATPVKTAAKAAAKTTPAKAAGAAAAAPSTAPKAKTTV
PTSPKTAAELKKAADELLKKKPARAAKAAAPEGEAAEAAEPAKKKAARAPKAAAAPAAAK
TAAAKAPAKRGRKPKAKEEAEDDADLSDIESDLEGEPEAEPEAPAADVSAPVEKVKPLRM
KISKAKERALMKEFGLDETVLSEEDMAKRRSQLKKLITLGKTRGYLTQGEISDHLPDKLV
DAETMEVVVAMLSDMGVAVYEQTPDAETLFQNNVTPTATTVEEAEEEAEAALSTVDSEFG
RTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLMDMMEAISASPATIAEILNMAEEIR
SGKVVISAVVDGFSDPDEADDYVAEEDFDEYDEDDDDDGKGGSKAMTRLLEKLKNEALER
FDELRALFEKMHKIYDKEGYGSPSYMKVQREISTKLMTIRFTAKTIEKLCDMVRAQVDDV
RKKERELRRIIVDKCGMPQEMFIKEFPANLLNLQWVEKQAAAAKPWSTVMERNIPPVQEL
QQNLMDLQARVVVPLTELKAINKRMNAGEASSRDAKKEMIEANLRLVISIAKKYTNRGLQ
FLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETI
NKMNRISRQHLQEFGFEPDASILAAKMEIPEDKIRKIMKIAKEPISMETPIGDDDDSHLG
DFIEDTNNTAPVDAAMQAGLRDVVKDILDGLTPREAKVLRMRFGIEMSTDHTLEEVGKQF
DVTRERIRQIEAKALRKLKHPSRSDKLRSFIDSL
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcaaaagtccgcgaagtcgcccaagtccaccgccgccgcaccggcccaggcc
aagtccgctgcaacccctgtgaaaaccgccgccaaggccgctgccaagaccacccccgcc
aaggctgcgggagcggctgcagcagcgccctcgaccgcgccgaaagccaagaccaccgtg
cccaccagtcccaagaccgctgccgaactgaaaaaagccgccgatgagctgctgaagaaa
aaacccgcccgcgccgccaaggccgccgcgcccgaaggcgaggccgccgaggccgccgaa
cctgccaagaagaaggctgcgcgcgcccccaaggccgccgctgccccggctgctgccaag
acggccgccgccaaggccccggccaaacgcgggcgcaagcccaaggccaaggaagaggcg
gaggacgacgccgacctgtcggacatcgaatccgacctggaaggcgagcccgaggccgag
cccgaggcgcctgccgccgacgtcagcgcgcctgtcgagaaggtcaagccgctgcgcatg
aagatcagcaaggccaaggaacgcgccttgatgaaggaattcggcctggacgagaccgtc
ttgtccgaagaggacatggccaagcgccgctcgcagctcaagaagctgatcacgctgggc
aagacgcgcggctacctgacgcagggcgagatctccgaccacctgcccgacaagctggtg
gacgccgagaccatggaagtggtggtggccatgctcagcgacatgggcgtggccgtctat
gagcagacgcccgacgccgagacgctgttccaaaacaacgtgacgcccaccgccaccacg
gtggaagaggccgaagaagaggccgaggcggccctgtccaccgtggacagcgagttcggc
cgcaccaccgacccggtgcgcatgtacatgcgcgagatgggcacggtggagctgctcacg
cgcgagggcgagatcgagatcgccaagcgcatcgagggcggcctgatggacatgatggag
gccatcagcgcatcgcctgcgaccatcgccgagatcctcaacatggccgaggaaatccgc
agcggcaaggtcgtcatctccgccgtggtggacggcttctccgaccccgacgaggccgac
gactacgtggccgaggaagacttcgacgagtacgacgaggacgacgacgacgacggcaag
ggcggctccaaggccatgacgcgcctgctggaaaagctcaagaacgaggcgctggagcgc
tttgacgagctgcgcgcgctgttcgagaagatgcacaagatctacgacaaggagggctac
ggcagcccgtcgtacatgaaggtgcagcgcgagatctccaccaagctgatgaccatccgc
ttcacggccaagaccatcgagaagctgtgcgacatggtgcgcgcgcaggtggacgacgtg
cgcaagaaggagcgcgagctgcgccgcatcatcgtggacaagtgcggcatgccgcaggag
atgttcatcaaggagttcccggccaatctgctgaacctgcagtgggtcgagaagcaggct
gccgcggccaagccctggagcaccgtgatggagcgcaacatcccgccggtgcaggagctg
cagcagaacctgatggacctgcaggcgcgcgtggtggtgccgctgaccgagctcaaggcc
atcaacaagcggatgaacgccggcgaagccagctcgcgcgacgccaagaaggagatgatc
gaggccaacctgcgcctggtgatctcgatcgccaagaaatacaccaaccgcggcctgcag
ttcctggacctgatccaggaaggcaacatcggcctgatgaaggcggtggacaagttcgaa
taccgccgcggctacaagttctcgacctacgccacgtggtggatccgccaggcgatcacc
cggtccatcgcggaccaggcgcgcaccatccgcatcccggtgcacatgatcgagaccatc
aacaagatgaaccgcatcagtcgccagcacctgcaggagttcggcttcgagcccgatgcg
tccatcctggcagccaagatggagatccccgaggacaagatccgcaagatcatgaagatc
gccaaggagccgatctcgatggaaacgcccatcggggacgacgacgacagccacctgggc
gacttcatcgaggacaccaacaacaccgcgccggtggacgccgccatgcaggccggcctg
cgcgacgtggtcaaggacatcctggacggcctgaccccgcgcgaggccaaggtgctgcgc
atgcgcttcggcatcgagatgagcaccgaccacacgctggaagaagtcggcaagcagttt
gacgtgacgcgcgagcgcatccgccagatcgaggccaaggcgctgcgcaagttgaagcac
cccagccgcagcgacaagctgcgcagcttcatcgattcgctgtaa
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