Pulveribacter suum: C7H73_12785
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Entry
C7H73_12785 CDS
T05362
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
melm
Pulveribacter suum
Pathway
melm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
melm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7H73_12785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
melm03019
]
C7H73_12785
03009 Ribosome biogenesis [BR:
melm03009
]
C7H73_12785
Enzymes [BR:
melm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
C7H73_12785
Messenger RNA biogenesis [BR:
melm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C7H73_12785
Ribosome biogenesis [BR:
melm03009
]
Prokaryotic type
rRNA processing factors
C7H73_12785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AVP58453
UniProt:
A0A2P1NN60
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All DBs
Position
2803277..2806525
Genome browser
AA seq
1082 aa
AA seq
DB search
MKRMLINATQPEERRLAIVDGQKLLDYEIEIEGREQRKGNIYKAVVTRVEPSLEACFVDY
GEDRHGFLPFKEISKQYFAEGVSASQARISEVIREGQELIVQVEKEERGNKGAALTTFIS
LAGRYVVLMPNNPRGGGVSRRIEGEDRAELKEAMDQLEYPKGMSIIARTAGIGRSAPELQ
WDLNYLLKLWHAVDGAAKAGRGAFLIYQESSLVIRAIRDYFNNDIGDILIDTDDIYEQAQ
QFMAHVMPEHAARVKRYRDDAPLFSRFQIEHQIESAYSRTVTLPSGGAIVIDHTEALVSV
DVNSARAIKGGDIEETATRTNLEAADEVARQMRLRDLGGLIVIDFIDMEESKNRRDVENR
LRDALRQDRARVQFGAISKFGLLEMSRQRLKPSLSEGAHIRCPLCDGTGHVRDTEGFSLQ
MLRMIQEESMKDNTAAVHCQVPVEVASFLLNEKRTEVAKIELKQRVSVVLIPNKTLETPH
YRLERLKHDDPRLDGLEASYKLADEAEEQTRITRRSQEPTNKQTPIIKGVLPDAPAPVAE
PRPQAAGQPPRGNGAGQQQPRAAAPAPAARPAPAVAPAPAPEQGFFAWLKSLFGLGATAA
APAPAMQPAPQPTAQPEGSARGDGRRSGERGRGGRGGRGGEGSRDGNGNGSAQGNGEGRG
RRGEGRSNGSEGRGQAGEGRELREPREPREPRNGRGGRERGEQLEGEGRREPREGRGSRE
RAPARSAAPQEGALDTSAQALPLDDAANAQRGERAAHSDERNGERGERSGERRSRRGERG
PRTIDASAPAPAAGQDFVDTAPLSALPDLDLTPPAVSDGTAQEASAPDAAEPRRERRSRD
RYGRDRRERGERTPRTADADASASAPAEHGEDAEEMLDIDLTASGTAPQGSEQPARRSYF
AAPGAEEAAAPAPQAAAAREALPVPAPAEDVALQAHPAVVAEAPAPAPAPAPAPAPAPAP
VPAPSPVAAVPAPASSPAPAPAPAAAIAPAAPSPAPQARAFVLPVDDLAQMAQASGLQWV
NSDADKIAAAQAAIAAEPAPVHVPRERPDMPVQDEGPLVLVETRRELRELQLPFEQQQAP
RA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggatgctcatcaacgccacgcagcccgaggaacggcgcctggccatcgtggac
ggccagaagctgctggactacgaaatcgaaatcgaagggcgcgagcagcgcaagggcaac
atctacaaggccgtggtgacgcgcgtcgagccgtcgctggaagcctgtttcgtggactac
ggcgaggaccgtcacggcttcctgccgttcaaggaaatctccaagcagtactttgccgag
ggcgtctcggccagccaggcgcgcatcagcgaggtgatccgcgagggccaggagctcatc
gtccaggtcgagaaggaagagcgcggcaacaagggcgcggcgctgaccaccttcatcagc
ctggccggccgctacgtggtgctgatgcccaacaacccgcgcggtggtggcgtgtcgcgc
cgcatcgagggcgaggaccgcgccgagctcaaagaagcgatggaccagctcgagtacccc
aagggcatgagcatcatcgcgcgcactgccggcatcggcaggagcgcccccgaactgcag
tgggacctgaactacctgctcaagctgtggcacgccgtggacggcgccgccaaggccggg
cgcggtgcctttctgatctaccaggaatcgagcctggtgatccgcgccatccgcgactat
ttcaacaacgacatcggcgacatcctgatcgacacggatgacatctacgagcaggcgcag
cagttcatggcgcacgtcatgcccgagcatgctgcccgcgtgaagcgctaccgtgacgat
gcgccgctgttctcgcgctttcagatcgagcaccagatcgagtcggcctactcgcgcacc
gtgaccctgccctcgggcggcgccatcgtcattgaccacaccgaggcgctggtgtccgtg
gacgtgaactcggcgcgcgccatcaagggcggcgacatcgaggagaccgccacccgcacc
aacctggaggccgccgacgaagtcgcgcgccagatgcgtttgcgtgacctgggcggcctg
atcgtcatcgacttcatcgacatggaagagtcgaagaaccgccgcgacgtggaaaaccgc
ctgcgcgacgcgctgcgccaggaccgtgcccgcgtgcagttcggcgccatcagcaagttc
ggcctgctggagatgagccgccagcgcctgaagccctcgctgtccgaaggcgcgcacatc
cgctgcccgctgtgcgacggcaccggccacgtgcgggacaccgaaggcttctcgctgcag
atgctgcgcatgattcaggaagagtccatgaaggacaacacggccgccgtgcactgccag
gtgccggtggaagtggccagcttcctcttgaacgaaaagcgcaccgaggtcgccaagatc
gaactcaagcagcgcgtgtccgtggtgctgatccccaacaagacgctggagaccccgcac
tacaggctcgagcgcctcaagcacgacgacccgcgcctggacgggctggaagccagctac
aagctggccgacgaggccgaggagcaaacgcgcatcacccgtcgctcgcaggagcccacc
aacaagcaaacgcccatcatcaagggcgtgctgcccgatgctcccgccccggtggcagag
ccgcgcccgcaagccgctggccagccgccgcgcggcaacggcgccggtcagcagcagcca
cgcgccgccgcccccgcgccggccgcacgcccggccccggctgtggccccggcaccggcg
cctgagcagggcttctttgcctggctcaagagcctgtttggcctgggtgccacggccgcg
gccccggccccggccatgcagcccgcgccccagcccaccgcccagcccgaaggcagcgca
cgcggcgatggccgccgcagcggcgaacgcggccgtggcgggcgcggtggccgtggcggc
gaaggcagccgcgacggcaatggcaatggcagcgcccagggcaacggcgaaggccgtggc
cgccgcggcgaaggccgcagcaacggcagcgaaggccggggtcaggcaggcgaaggccgc
gagctgcgcgagccgcgtgagccgcgtgaaccacgcaatggccgtggcggccgcgagcgc
ggcgagcagctcgaaggcgaaggccgccgcgagccgcgcgaaggccgcggcagccgcgag
cgcgcacccgcccgcagcgccgccccgcaggaaggtgcgctggacacctccgcccaggcc
ctgccgctggacgacgccgccaacgcccagcgcggtgaacgcgcagcgcacagcgacgag
cgcaatggcgaacgcggtgaacgcagtggcgagcgccgcagccgccgcggcgagcgtggc
ccgcgcaccatcgacgcgagcgcacccgccccggccgccggccaggacttcgtcgatacc
gcgcccctgtccgccctgcccgacctggacctgacgcccccggccgtcagcgacggcacg
gcccaggaagccagcgcgccggacgcggccgagccgcgccgcgagcgccgttcgcgcgac
cgctacggccgtgaccgccgcgaacgcggcgagcgcacgccgcgcacggccgatgccgac
gcttctgcctctgcccccgccgagcatggcgaggacgccgaggagatgctggacatcgac
ctcaccgcctccggcaccgcgccccagggcagcgagcagccggcgcgccgcagctacttt
gccgcccctggggccgaagaagccgccgcgcccgccccgcaagccgccgccgcccgcgag
gccctgcctgtgccggcaccggccgaagacgtggcgctgcaagcgcacccagcggttgtg
gccgaggctccggctccggctccggctccggctccggcgcctgctccggcgcctgctcct
gttcctgcgccttcgcctgtagcagcggtcccggcacccgcgtcttccccggcaccggca
ccggccccggctgcagccatcgccccggccgcccccagccccgcgccgcaggcccgggcc
ttcgtgctgcccgtggacgacctggcccagatggcccaggcctcgggcctgcagtgggtg
aactcggacgcggacaagatcgccgccgcccaggccgccatcgccgccgagcccgccccc
gtgcacgtgccgcgcgagcggcccgacatgccggtgcaggacgaaggcccgctggtgctg
gtggaaacccgccgcgaactgcgcgaactgcagctgccattcgagcagcagcaggccccg
cgcgcctga
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