Methanococcoides orientis: J7W08_00405
Help
Entry
J7W08_00405 CDS
T08012
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
melo
Methanococcoides orientis
Pathway
melo03410
Base excision repair
melo03430
Mismatch repair
melo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J7W08_00405
03430 Mismatch repair
J7W08_00405
03440 Homologous recombination
J7W08_00405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
melo03400
]
J7W08_00405
DNA repair and recombination proteins [BR:
melo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J7W08_00405
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J7W08_00405
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J7W08_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Rhabdo_matrix
ZMYM4
Motif
Other DBs
NCBI-ProteinID:
UGV40845
LinkDB
All DBs
Position
complement(81518..82831)
Genome browser
AA seq
437 aa
AA seq
DB search
MIEMQNLIELAKQIASIIEEYEHARVISHNDADGISSAAIICQALLRKGIPYHLTIVGRL
DESVAEMVNETTSDNDIVIFCDMGSGQSEIIEKVEQDVIVIDHHKPVGDSPSKAMINPHM
VGIDGAVHLCAATTTYLVAKALDEENVDLAGLAIAGAVGDKQLFETANKVILDEAVEAGI
VSVKKGLKVGSGDIADILENTPEPYLDITGEREKIDHFLEMLDIHGNIDSLDTEQLQKLT
STIALKLTKAASPEAIEAAIGDVYILNREIVRNAYDLVAIMNTCGKQKVPGLAIALCMKD
ESALEEAQDITLKSQKAIIADIKKAEELLQKGKNIYYLSGKELESTGMVASTIIRYVHPD
MPFIAINEVEGVIKISGRGSRELVEKGLDLAYAMRTAASSVGGDGGGHSVASGASIPLGR
TEEFIALVDDIIGEQLN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ttgatagaaatgcagaatttaatagaacttgcaaaacagatagcttccatcattgaagaa
tatgaacatgcacgtgtcatctcccataatgatgcagacggcatatcttcagccgcgatc
atctgccaggcactgctcagaaaagggataccataccatctgacgatcgttggacgtctg
gacgaaagcgttgcagagatggtaaatgaaactacttctgataatgatattgtgatattc
tgcgatatgggtagcgggcaatcagagataatcgaaaaggtcgaacaggatgtgatcgtg
atcgatcaccacaagccagtcggagattcgccatccaaagccatgataaacccacatatg
gtcggaattgacggagcagtgcacctgtgtgcggccactacaacataccttgttgcaaag
gcactggatgaagaaaatgttgaccttgcaggacttgctatagcgggtgccgttggagat
aaacaactgttcgaaactgcgaacaaggtcatactggatgaagctgttgaagccgggata
gtttctgtgaaaaagggactgaaagtaggcagcggtgatattgcggacatactggagaat
acaccggaaccctacctagatattacaggcgaacgtgaaaaaatagatcatttcctggaa
atgcttgacatacatggcaatatcgattcacttgatactgaacaactgcaaaaactaaca
tccacaattgcattaaaacttacaaaagccgccagccctgaagctattgaagctgctatt
ggagatgtatacatactgaacagagagattgtcaggaatgcctacgaccttgtagccatc
atgaacacctgtggcaaacagaaagttcccggacttgccattgcactttgcatgaaggac
gagtcagcactggaagaagcacaggacataactctcaaaagccagaaggccatcatcgcc
gacattaagaaagcagaagagctcttgcaaaagggtaagaacatctactacctgagtgga
aaggaacttgaatccacaggaatggttgccagtacaattataagatatgtacatccggac
atgccattcatcgcaattaacgaggtggaaggcgtgatcaagatatccggaagaggaagc
agggaactggtcgaaaaaggacttgaccttgcctatgcaatgcgaactgcagcatcatct
gttggcggggatggcggagggcacagtgtagcttccggtgcatcaataccacttggaaga
acagaggaattcattgcacttgtcgatgacattatcggagaacagctgaactga
DBGET
integrated database retrieval system
