Methanococcoides orientis: J7W08_01100
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Entry
J7W08_01100 CDS
T08012
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
melo
Methanococcoides orientis
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
melo03016
]
J7W08_01100
Enzymes [BR:
melo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J7W08_01100
Transfer RNA biogenesis [BR:
melo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J7W08_01100
Prokaryotic type
J7W08_01100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UGV40962
LinkDB
All DBs
Position
197880..198872
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AA seq
330 aa
AA seq
DB search
MVSSRISKDVDMMVVKAHATTNAAYGCKPEDRPILDYINLGVVNIDKPVGPTSHEVTAWI
RDMLGVSKAGHSGSLDPGVTGVLPVMLGKATKAVSALRLSGKEYICLMHLHNDVPEIKIK
RVCKDFNGPIYQTPPIISAVKRQLRIRNIYYLDVLEIEGREVLMRVGCEAGTYLRKLCHD
IGLILGCGGHMKQLRRTGTGPFREDTLVTLYDLKDACVFWQEDNDETELRKLILPMEAGL
SHLPRIVIRDTAVDAICRGAYLAVSGIVSFSKSIKKDDKIALFTLKGEAVALCKASMDSD
ELLNNDHGIACITERVIMDAAIYPSCWTTK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggtttcatcacgaatttctaaagacgtggacatgatggtcgtaaaggcacatgccact
acgaatgccgcatacggttgcaagcctgaagatcgtcctattcttgattatattaatctg
ggtgtcgtgaacatcgacaaacctgttggtccaaccagccatgaggtaacagcatggata
agggatatgctgggtgtaagcaaagccggtcattcaggttcacttgatcctggtgtaaca
ggtgtgcttccagtgatgcttggaaaagctactaaagcagtctcagccctgcgcctttca
ggcaaagagtacatctgcctcatgcaccttcacaatgacgttcctgaaataaagatcaag
cgtgtatgtaaggacttcaacggtcccatttaccagaccccgcctattatctctgctgtc
aagaggcagttgcggatcaggaatatctattatcttgatgttctggagatcgaaggtagg
gaagtgctcatgagggtgggctgtgaggcagggacatatctgcgcaagctttgtcatgat
attggtctcatactgggttgtggtggccacatgaagcagctacgcaggacaggtacaggt
ccattcagggaagacactctggtgactctctacgatcttaaggatgcctgtgttttctgg
caagaggacaacgatgagaccgagcttcggaagcttatactcccaatggaggctggtttg
tctcatctgccccgcattgttatacgcgatactgccgtagatgcgatatgcaggggtgca
taccttgcagtttcaggtatcgtttcttttagcaagagcataaaaaaggacgacaagatc
gcgttatttaccttaaaaggagaagctgtggcactatgcaaggcatctatggattccgat
gaactactgaacaatgatcacggaatagcctgtatcaccgaaagagtaataatggatgcc
gctatttatccaagttgctggacgacaaaataa
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