Methanococcoides orientis: J7W08_05165
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Entry
J7W08_05165 CDS
T08012
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
melo
Methanococcoides orientis
Pathway
melo03420
Nucleotide excision repair
melo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J7W08_05165
03430 Mismatch repair
J7W08_05165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
melo03400
]
J7W08_05165
Enzymes [BR:
melo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J7W08_05165
DNA repair and recombination proteins [BR:
melo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J7W08_05165
MMR (mismatch excision repair)
Other MMR factors
J7W08_05165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
AAA_30
AAA_11
Vps39_1
Motif
Other DBs
NCBI-ProteinID:
UGV41670
LinkDB
All DBs
Position
1053483..1056539
Genome browser
AA seq
1018 aa
AA seq
DB search
MASTKLNDNQQKAVTYTEGPLLILAGPGSGKTFTITEKVVDLTENNLSPEKILALTFSEK
AAGEMQERIENKIGVGSSITVSTFHSFCNDLIREFSLYLGINQNAKLISKEHSHVWGIKN
IDSFGFQNLAIPTQPYDLITSLLEGVSQLKDHLVSPEKLAEYAGRNLEDASIDEGERDVL
LKLSDLARFYEHYQQYKSDNGFLDYDDMITMACNLLETNDVVRNMVRSRYDYVLVDEFQD
TNFAQLFLVHLIADGNNLTCVADDDQCIYLFRGAYLANIEQLQEYYHTLEKIPLEKNYRS
SSQIVQLSQQLIANNPQRQEKKLTAHNGEKSEVKVVKAPDDVSEAEWVAEEITNMINEGV
RPGEIFILTRKRADGKKFSESLKQRMVPVEFVGSIQLNRFPVVREAMAYLHVVADPFNNG
IAFAKILSREGLSEHNLQKINLQALKISRDDSDTGDGIYSVLLYHLDELDISQKDLIRSI
VSRLNELIEYKKSHLPSDTVKHMLSKKTDFYRTQLQEDTQASRRNISILNSLVTTVEDLE
LVDGGSELDTVVEDLELVFGLDLDEGVSSEEDTVKVMTIHQSKGKEAKVVFVCDMATRHL
PLTYRRKAFTVPKALSKGRQRDVDEKVLHLEEERRLAYVAMTRAKEELYLMFPEKYEGNK
RKVSPSEFLAQLEYTSNPLIEYIEAEQFEKKSEVEEVSPLMKKKDEYLRMLSMYSKQGQL
KQALESLVVLAQLREIEDEGNLSAFDAKDFLQVNPKQPQELEDLIDNNIPPLVDPNMRFS
ASKIKTYQDCPLKFKYGTVLNIPTPQKAYFQVGTDVHSVYEQLSQMDMKGESIDITTANK
LLDDIWDPTAFPSSTLENQEHSKMKKMLDFWFRFEADNPNETVAVEEWFDLDLNGAIFGG
VIDRIDRTQEGEYIVIDYKTGKTTLPKSKLKDYVQLALYCLAVKEMYGKLPVQAGLLYVN
PEVQELRMMDVDEERIGMVVDEINAVVARVLRDDFEVDGEPNCYFCDFKGICEWGEEE
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
ttggcatccaccaaactcaacgataatcagcaaaaagcagtcacatacaccgaaggccca
ctcctcatcctcgcaggtcccggctcaggaaagacattcaccatcacagaaaaagttgta
gacctaactgaaaacaacctctccccggaaaagatacttgcactaaccttctccgaaaaa
gcagccggagagatgcaggaaaggatagagaacaaaataggcgttggaagcagcatcacg
gtttccacattccactcattctgcaatgacctgatacgcgagttctccctgtaccttgga
attaaccagaacgcaaagctgatctcaaaggaacactcccacgtctggggcatcaagaac
atcgattccttcggttttcagaaccttgccatccccacacagccatacgacctcattacc
agcctgctggaaggagtatcccagctgaaggaccaccttgtctcaccggaaaagctggcc
gaatatgcaggcaggaatctggaagatgcgagcatcgacgaaggtgaaagggatgttctg
ttaaagctcagcgaccttgcaaggttctatgagcattaccagcagtacaagagtgacaac
ggattccttgactacgacgacatgatcaccatggcctgcaacctccttgagacgaatgat
gttgtcaggaacatggtgagatccagatatgactatgttctggtggatgagttccaggac
accaatttcgcacagctgttcctcgtgcacctgatagctgatggcaataacctgacctgt
gtggctgacgatgaccagtgcatctaccttttcagaggagcatatcttgctaacatagaa
caattgcaggaatactaccacacccttgagaagatcccgcttgagaagaactacaggtca
agctcacagatcgtgcaactgtcccagcagctcattgcgaacaacccgcagaggcaggag
aagaaactcacggcccacaatggcgagaagagcgaggtaaaggtggtcaaggcgcctgat
gatgtgagcgaggcagagtgggtcgctgaagagatcactaacatgatcaatgaaggtgtc
cggccgggggagatattcatacttacacgaaaaagggctgacggaaagaagttcagcgaa
tcattgaagcagaggatggtgcctgtggaatttgtgggaagcatccagctcaaccgtttc
ccggtggtgagggaagcaatggcatacctccacgtggtggccgatccgttcaacaacgga
atcgcctttgcaaagatactgtcaagggaaggactgagcgagcataacctgcagaagatc
aaccttcaggcattgaagatcagcagggatgacagcgatacaggcgacgggatatactcc
gtgctgctctaccaccttgacgagcttgacatcagccagaaggacctgataaggtcgatc
gtatcccggctcaatgagctgatagaatacaaaaaaagccacctgccatcggatactgtg
aagcacatgctgtccaagaagaccgacttctacaggacacagctgcaggaggatacgcag
gcgtccagaaggaacatttccatcctgaactcccttgtcaccactgtggaagaccttgag
ctcgttgatggtggcagtgaactggataccgtggttgaggacctggagctggtcttcggc
ctggacctggatgagggagtgtccagcgaggaggatactgtgaaggtgatgaccatccac
cagtccaagggcaaggaagcgaaggtggtgttcgtctgcgacatggccaccaggcacctc
cctctgacctacagaagaaaggccttcaccgtgccaaaagcgctctccaagggcaggcag
agggatgtggacgagaaggtgctgcaccttgaggaggaaagaaggctggcctatgttgcc
atgacaagggcaaaggaagaactttacctgatgttccctgagaagtatgaaggcaacaaa
aggaaggtctccccaagcgagttccttgcacagcttgagtacacgtcaaatccgctgatc
gagtatatcgaagcagagcagttcgaaaagaagagcgaggtcgaggaggtttcacccctg
atgaagaaaaaggacgaatacctccggatgctcagcatgtattcaaagcagggccagtta
aagcaggccctggaatcccttgtggtcctcgcccagctgagggagatcgaggatgaaggc
aacctgtctgcttttgatgcaaaggatttcctgcaggtcaaccccaagcagccgcaggaa
ctggaggacctgatcgataacaatatcccgccccttgtggacccgaacatgagattctcc
gcttccaagatcaagacataccaggactgcccgctgaagttcaagtacgggacagtcctc
aacattcccacgccgcagaaggcctatttccaggtcgggacagacgtgcactccgtctac
gaacaactgtcccagatggacatgaagggagaatccattgacatcaccacagccaacaaa
ttgctagatgatatatgggaccctacagcattcccctccagtaccctggaaaaccaggaa
cacagcaagatgaagaagatgctggacttctggttccgctttgaagccgacaatcccaac
gagaccgttgcagtggaagaatggttcgacctcgacctgaacggtgccattttcggagga
gtcatcgacaggatagaccggacacaggaaggcgaatacatcgtcatagactacaagacc
ggcaagaccaccctcccaaagagcaagctgaaagactatgtccagctggctctctattgc
ctggccgtgaaggagatgtacggcaagctcccggtacaagccggattgctttacgtcaac
cccgaggtgcaggaactaaggatgatggatgttgatgaggagaggatcgggatggtggtg
gatgagatcaatgctgtggttgcaagggtcttgagggatgattttgaggttgatggggag
ccgaattgttatttctgtgattttaaggggatctgtgagtggggggaggaggagtga
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