Methanococcoides orientis: J7W08_06420
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Entry
J7W08_06420 CDS
T08012
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
melo
Methanococcoides orientis
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
melo03016
]
J7W08_06420 (endA)
Enzymes [BR:
melo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
J7W08_06420 (endA)
Transfer RNA biogenesis [BR:
melo03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
J7W08_06420 (endA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
UGV39770
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Position
1350848..1351903
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AA seq
351 aa
AA seq
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MRAEIIKDRVLVEKKAINELYNTGYYGRPKDNGLELTLIEAAYLAYRGKIEVENDGKVLD
FAGFFKKASTLQPAFELKYIVYKDIRERGFYVQPGVTDFRVYPRGSHPGKGAAKQFVYVR
SERVPMPLKDLLRSLNAAENVRKQMILAIVDEESDITFYEVKRPRIKGGMGDTLYPDINT
DATFLEDRVIVWDEDASTTLFENGFYGKPLDKQRLQLSLVESRYLMENGVINITDRQDTE
LDSESFTEIASKIEPEFLLKNSVYTDLREKGVVPKTGFKFGSHFRVYAQVESPAKIPHSE
YLVHSIPSDHEFRLPVMSRAVRLANSVRKSMLYAIPTDEGIDYIDIGRVKM
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
ttgagagcagagataatcaaagaccgtgtacttgtagagaaaaaggcaataaacgaactt
tacaatacaggatactacggcaggcccaaggacaacgggctggaacttacacttattgaa
gctgcatatcttgcataccgcgggaagatcgaagttgagaatgatggcaaagtgcttgat
tttgccggatttttcaaaaaggcttcaaccctgcagccagcattcgagctaaagtacatt
gtttacaaggacataagggaaagaggattctacgtccagcccggagttactgatttccga
gtctacccacgtggaagccatcccggaaaaggcgctgcaaaacagttcgtctatgtcagg
tctgaaagggtgccaatgccactcaaggacctactccgatcactgaacgcagctgaaaat
gtccgcaagcagatgatactcgcaatagtggatgaagagagtgacatcaccttctatgag
gtaaagagaccaagaataaaaggaggaatgggagatacactttacccggacatcaataca
gatgccacgttcctcgaggacagggtcattgtatgggacgaggatgcatccacaacactc
tttgaaaatggtttctacggcaagccgcttgataaacaaagactccagctttcacttgtg
gaatcacgctacctgatggagaacggcgtgatcaatatcacagaccgtcaggatacggaa
ctggatagcgagtcattcacagagatcgcttcgaagatcgagccggagtttctcctgaag
aacagtgtgtacaccgaccttcgtgagaagggagttgttccaaaaacaggattcaagttc
ggtagccatttccgtgtttatgcacaggttgaatcccctgcaaagatacctcactcggaa
tatctggtacattcaattccttcagaccatgagttcagacttcctgtaatgtcaagagct
gtacgccttgccaacagtgtcaggaaaagcatgctgtatgcgatccctaccgatgaaggc
attgactacatcgatattggaagagtgaagatgtga
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