KEGG   Methanococcoides orientis: J7W08_07005
Entry
J7W08_07005       CDS       T08012                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
melo  Methanococcoides orientis
Pathway
melo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:melo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    J7W08_07005 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:melo03400]
    J7W08_07005 (uvrA)
DNA repair and recombination proteins [BR:melo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     J7W08_07005 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      J7W08_07005 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase AAA_22 nSTAND3 Viral_helicase1 AAA_21 nSTAND1 DnaJ_CXXCXGXG BCA_ABC_TP_C AAA_23 T2SSE cobW AAA_25 MMR_HSR1 zf-ribbon_3 MIF Pox_E10 Zn-ribbon_8
Other DBs
NCBI-ProteinID: UGV39874
LinkDB
Position
1472578..1475403
AA seq 941 aa
MSLKNIIVKGAKEHNLKNVDLVLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGLMEKPDVEYIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLYARIGIR
HCPKCGKVIEPQSVDQIVDSIMKIEEGSKVHILAPLVRERKGEYKKLLTDLRGEGFARAR
VDGEIVELDDAETIELGRYYKHNIEVVVDRLAIKKGMEERLSDSVETALEKSGGTLMVHV
LDGEEMVFSENLACTDCGIGFEEMEPSAFSFNSPQGACEECHGLGTSMEFDPELIVPDPT
LTLREGAVETWNKKDGYYMQALESVGKRFGFSLDVPFEELEQKHKDIIFNGTNEMIDFVH
VGKNGGMWRHKGRFRGVISNISKTYDNTESENTKDRLRKYITTKPCTTCKGNRLKPASLA
VSINESNIIEVTQMSVETALHFFEELEPNLTPREYSIARLILKEIKARLGFLMDVGLDYL
TLSRSAATLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNLRLINTLKHLRDIG
NTVVVVEHDEETILNSDHVVDMGPGAGIHGGEVVAEGTPEQIMEHPDSLTGQYMSGKLEI
AVPKKRRKPTGKLILKGASQNNLKGIDAEFPLGVMACVTGVSGSGKSTLINETLNKVLAQ
KLHRARDRPGKYKDIKGLDQIDKVITIDQSPIGRTPRSNPATYTNLFTPIRELFAQTKMS
KSRGYKPGRFSFNVRGGRCETCSGDGIITIEMHFLPDVYVPCEVCHGKRYNRETLEVTYK
DKTIADVLDMTVEEAVDFFENIPKIKNKLQTLYDVGLGYIKLGQSSTTLSGGEAQRVKLA
TELSRRSTGKTVYILDEPTTGLHFDDVNKLLDVLQRLVDAGNTVIVIEHNLDVIKTADWV
IDLGPEGGERGGSIIAKGTPEKIAKSKVSYTGEFLKRVLKK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgtctctcaaaaatataatcgtaaaaggtgctaaagagcacaacctcaagaatgtcgac
ctggtcctaccccgtgataaactgatagtcatcacaggtctcagcggatcaggaaaatca
tcccttgcttttgataccatatatgcagagggacagaggcgatatgttgaatcgctctca
gcttatgcaaggcagttcctggggctgatggaaaaaccggatgttgagtacatcgaggga
ctttctcctgcgatctccatcgagcagaagaccacaagcaagaaccctcgttccactgta
ggaacagttaccgagatctatgattacctcaggctgctctatgcaagaataggcatcagg
cattgccctaaatgtggcaaggtcatcgagcctcaaagtgtcgaccagatcgttgacagc
attatgaagatagaggaaggctcaaaggttcacatccttgcacctcttgttcgtgaacga
aaaggagagtacaagaagctgctcacagacctgaggggagaaggctttgcacgtgcaagg
gtggatggcgagatcgttgaactggatgatgccgaaaccatcgaacttgggcgctactac
aaacacaacatcgaggttgtagtagaccgccttgccatcaaaaaagggatggaagaaaga
ttgtccgactcagtggaaaccgcacttgagaagagcggcgggacattgatggtacatgtc
cttgacggcgaagagatggtattcagtgaaaacctggcatgtacggattgtggaattggt
tttgaggaaatggaaccttctgcgttctctttcaatagcccgcagggtgcctgtgaagaa
tgtcacgggcttggtacttcaatggagttcgaccctgaacttatcgttcctgaccccacc
cttacattgagagagggggctgtcgagacatggaacaagaaagacggctactacatgcag
gcgctggagtccgtagggaagcgtttcgggttctcactcgatgtgcccttcgaggaactt
gaacagaagcacaaggacataatcttcaacggcaccaacgaaatgatcgatttcgtgcat
gtcggtaagaacggtggcatgtggaggcacaaaggacgcttccggggagtcatctccaac
atctcaaagacgtatgataatactgagtcagagaacacaaaggacaggctgaggaaatac
atcaccaccaaaccctgtacgacatgcaaaggcaacagactgaaacctgccagcttggct
gtgagcatcaatgaaagcaacatcattgaggtcacgcaaatgtctgtggaaactgcattg
catttctttgaagaacttgaaccaaaccttacacctcgcgaatattccatcgcaaggctg
atccttaaggaaataaaggcaaggcttggattcctcatggacgtcggacttgattacctt
acattgagccgctcggctgcgacactatcagggggtgaggcacagcgtataaggcttgca
acacagataggatccagtcttatgggcgtattgtatattctggatgagccaagcatagga
ctgcaccagagggacaatctcaggcttatcaatacattgaaacatcttcgtgatatcggc
aacacagttgtggttgtggaacacgatgaggaaacgatcctcaattcggatcatgtggtg
gatatgggaccaggagccggcatccacggaggagaagttgtagcagaaggcacacctgaa
cagatcatggaacacccggattcacttaccgggcaatacatgagcggaaaacttgagata
gccgtcccaaagaaaagacgcaagcccacaggcaaattgatcctcaaaggtgcatcacag
aacaacctcaaagggatcgatgcggagttcccgctcggggtcatggcatgtgtcacagga
gtatccggttcaggaaaaagtactctcatcaatgagacactcaataaggtgcttgcccag
aaattgcatcgtgcaagggacagaccgggtaaatataaggacataaagggtcttgaccag
atagacaaggtcataaccatcgaccagtcgcctatcggaaggacaccacgttccaatccg
gccacatatactaaccttttcacacccataagggaactctttgcacagacaaagatgtca
aaatcccgcggatacaaacctggaaggttcagcttcaatgtgcgcggaggcaggtgtgag
acctgttcaggtgacggtatcataactattgaaatgcacttccttcctgacgtttatgtg
ccctgtgaggtctgccatgggaagcgatacaaccgtgagacacttgaggtcacctacaag
gacaagaccatcgctgacgtacttgatatgaccgtagaggaagcagtggatttctttgaa
aatattccaaagataaagaacaagcttcagacactctatgatgttggtcttggttacatc
aaacttggccagtcctcgacaaccctctcaggaggagaggcacagcgtgtaaagcttgca
acagaacttagcaggcgttctaccggaaagacagtttatatccttgatgagccgacaacg
ggactacactttgacgatgtgaacaagttacttgacgtgctccagcgacttgtggatgca
ggcaatacggtcattgtcatagaacacaaccttgacgttatcaagacagcagactgggta
atagatctgggtcctgaaggtggagaacgtggtggcagtatcattgccaaaggtacaccc
gaaaaaatagcaaagagcaaagtatcctatacaggagaattcctgaaaagggtgctcaaa
aaataa

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