Methanococcoides orientis: J7W08_07005
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Entry
J7W08_07005 CDS
T08012
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
melo
Methanococcoides orientis
Pathway
melo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J7W08_07005 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
melo03400
]
J7W08_07005 (uvrA)
DNA repair and recombination proteins [BR:
melo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J7W08_07005 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J7W08_07005 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_22
nSTAND3
Viral_helicase1
AAA_21
nSTAND1
DnaJ_CXXCXGXG
BCA_ABC_TP_C
AAA_23
T2SSE
cobW
AAA_25
MMR_HSR1
zf-ribbon_3
MIF
Pox_E10
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
UGV39874
LinkDB
All DBs
Position
1472578..1475403
Genome browser
AA seq
941 aa
AA seq
DB search
MSLKNIIVKGAKEHNLKNVDLVLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGLMEKPDVEYIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLYARIGIR
HCPKCGKVIEPQSVDQIVDSIMKIEEGSKVHILAPLVRERKGEYKKLLTDLRGEGFARAR
VDGEIVELDDAETIELGRYYKHNIEVVVDRLAIKKGMEERLSDSVETALEKSGGTLMVHV
LDGEEMVFSENLACTDCGIGFEEMEPSAFSFNSPQGACEECHGLGTSMEFDPELIVPDPT
LTLREGAVETWNKKDGYYMQALESVGKRFGFSLDVPFEELEQKHKDIIFNGTNEMIDFVH
VGKNGGMWRHKGRFRGVISNISKTYDNTESENTKDRLRKYITTKPCTTCKGNRLKPASLA
VSINESNIIEVTQMSVETALHFFEELEPNLTPREYSIARLILKEIKARLGFLMDVGLDYL
TLSRSAATLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNLRLINTLKHLRDIG
NTVVVVEHDEETILNSDHVVDMGPGAGIHGGEVVAEGTPEQIMEHPDSLTGQYMSGKLEI
AVPKKRRKPTGKLILKGASQNNLKGIDAEFPLGVMACVTGVSGSGKSTLINETLNKVLAQ
KLHRARDRPGKYKDIKGLDQIDKVITIDQSPIGRTPRSNPATYTNLFTPIRELFAQTKMS
KSRGYKPGRFSFNVRGGRCETCSGDGIITIEMHFLPDVYVPCEVCHGKRYNRETLEVTYK
DKTIADVLDMTVEEAVDFFENIPKIKNKLQTLYDVGLGYIKLGQSSTTLSGGEAQRVKLA
TELSRRSTGKTVYILDEPTTGLHFDDVNKLLDVLQRLVDAGNTVIVIEHNLDVIKTADWV
IDLGPEGGERGGSIIAKGTPEKIAKSKVSYTGEFLKRVLKK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaaaaatataatcgtaaaaggtgctaaagagcacaacctcaagaatgtcgac
ctggtcctaccccgtgataaactgatagtcatcacaggtctcagcggatcaggaaaatca
tcccttgcttttgataccatatatgcagagggacagaggcgatatgttgaatcgctctca
gcttatgcaaggcagttcctggggctgatggaaaaaccggatgttgagtacatcgaggga
ctttctcctgcgatctccatcgagcagaagaccacaagcaagaaccctcgttccactgta
ggaacagttaccgagatctatgattacctcaggctgctctatgcaagaataggcatcagg
cattgccctaaatgtggcaaggtcatcgagcctcaaagtgtcgaccagatcgttgacagc
attatgaagatagaggaaggctcaaaggttcacatccttgcacctcttgttcgtgaacga
aaaggagagtacaagaagctgctcacagacctgaggggagaaggctttgcacgtgcaagg
gtggatggcgagatcgttgaactggatgatgccgaaaccatcgaacttgggcgctactac
aaacacaacatcgaggttgtagtagaccgccttgccatcaaaaaagggatggaagaaaga
ttgtccgactcagtggaaaccgcacttgagaagagcggcgggacattgatggtacatgtc
cttgacggcgaagagatggtattcagtgaaaacctggcatgtacggattgtggaattggt
tttgaggaaatggaaccttctgcgttctctttcaatagcccgcagggtgcctgtgaagaa
tgtcacgggcttggtacttcaatggagttcgaccctgaacttatcgttcctgaccccacc
cttacattgagagagggggctgtcgagacatggaacaagaaagacggctactacatgcag
gcgctggagtccgtagggaagcgtttcgggttctcactcgatgtgcccttcgaggaactt
gaacagaagcacaaggacataatcttcaacggcaccaacgaaatgatcgatttcgtgcat
gtcggtaagaacggtggcatgtggaggcacaaaggacgcttccggggagtcatctccaac
atctcaaagacgtatgataatactgagtcagagaacacaaaggacaggctgaggaaatac
atcaccaccaaaccctgtacgacatgcaaaggcaacagactgaaacctgccagcttggct
gtgagcatcaatgaaagcaacatcattgaggtcacgcaaatgtctgtggaaactgcattg
catttctttgaagaacttgaaccaaaccttacacctcgcgaatattccatcgcaaggctg
atccttaaggaaataaaggcaaggcttggattcctcatggacgtcggacttgattacctt
acattgagccgctcggctgcgacactatcagggggtgaggcacagcgtataaggcttgca
acacagataggatccagtcttatgggcgtattgtatattctggatgagccaagcatagga
ctgcaccagagggacaatctcaggcttatcaatacattgaaacatcttcgtgatatcggc
aacacagttgtggttgtggaacacgatgaggaaacgatcctcaattcggatcatgtggtg
gatatgggaccaggagccggcatccacggaggagaagttgtagcagaaggcacacctgaa
cagatcatggaacacccggattcacttaccgggcaatacatgagcggaaaacttgagata
gccgtcccaaagaaaagacgcaagcccacaggcaaattgatcctcaaaggtgcatcacag
aacaacctcaaagggatcgatgcggagttcccgctcggggtcatggcatgtgtcacagga
gtatccggttcaggaaaaagtactctcatcaatgagacactcaataaggtgcttgcccag
aaattgcatcgtgcaagggacagaccgggtaaatataaggacataaagggtcttgaccag
atagacaaggtcataaccatcgaccagtcgcctatcggaaggacaccacgttccaatccg
gccacatatactaaccttttcacacccataagggaactctttgcacagacaaagatgtca
aaatcccgcggatacaaacctggaaggttcagcttcaatgtgcgcggaggcaggtgtgag
acctgttcaggtgacggtatcataactattgaaatgcacttccttcctgacgtttatgtg
ccctgtgaggtctgccatgggaagcgatacaaccgtgagacacttgaggtcacctacaag
gacaagaccatcgctgacgtacttgatatgaccgtagaggaagcagtggatttctttgaa
aatattccaaagataaagaacaagcttcagacactctatgatgttggtcttggttacatc
aaacttggccagtcctcgacaaccctctcaggaggagaggcacagcgtgtaaagcttgca
acagaacttagcaggcgttctaccggaaagacagtttatatccttgatgagccgacaacg
ggactacactttgacgatgtgaacaagttacttgacgtgctccagcgacttgtggatgca
ggcaatacggtcattgtcatagaacacaaccttgacgttatcaagacagcagactgggta
atagatctgggtcctgaaggtggagaacgtggtggcagtatcattgccaaaggtacaccc
gaaaaaatagcaaagagcaaagtatcctatacaggagaattcctgaaaagggtgctcaaa
aaataa
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