KEGG   Methanococcoides orientis: J7W08_08290
Entry
J7W08_08290       CDS       T08012                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
melo  Methanococcoides orientis
Pathway
melo03030  DNA replication
Brite
KEGG Orthology (KO) [BR:melo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J7W08_08290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:melo03032]
    J7W08_08290
DNA replication proteins [BR:melo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     J7W08_08290
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N AAA_16 AAA_14 AAA_3 Rad17 TIP49 Mg_chelatase AAA_assoc_2 nSTAND3 ResIII RCF1-5-like_lid AAA_22 IstB_IS21 AAA_18 AAA_5 AAA_2 AAA_24 AAA_17 EAD11 AAA_11 FloA AAA_7 RNA_helicase DNAX_ATPase_lid UBA_Rad5 FANCI_S1
Other DBs
NCBI-ProteinID: UGV40099
LinkDB
Position
complement(1725877..1726848)
AA seq 323 aa
MTGGFEIKEEIWIEKYRPFKLEDIVGQKETTERLISYVKSGNLPHLLFSGPPGVGKTATA
VSIARELFGDGWRENFTELNASDERGIDVVRTKIKNFAKTSPIGGADFKIIFLDEADALT
SDAQSALRRTMERYTSNCRFILSCNYSSKIIEPIQSRCAVYRFRHLTEDSVAERCRHIAE
KEGLSIAEDGMDALKYVAQGDMRKAINALQAAALFDKTIHKDAIYRITATAHPEEIMELL
KTALSGNFVLARKKLDVLMLEKGLSGEDVVGQIYRAIFDMDVSGQRMVDLMDMIGEVDFR
LTEGANERIQLDALLAHFALTKE
NT seq 972 nt   +upstreamnt  +downstreamnt
atgactggagggttcgaaataaaagaagagatatggatcgagaaatacaggccttttaag
cttgaagacattgtaggtcaaaaggaaactacggaaaggctgatatcatatgtaaagagc
ggaaatcttcctcacttgttgttctcaggtcctcccggggttggaaagaccgcaacggct
gtgtccattgcaagggaactgttcggggatggctggcgcgagaacttcacggaactcaat
gcgtcagatgagcgcggtatcgatgtcgtaaggacgaagataaagaacttcgcgaagacc
tctcctattggtggtgccgacttcaagatcattttccttgatgaagcagatgctttgaca
tccgatgcacagtctgcactgcgtcgtacgatggagcgctataccagtaactgtcgtttt
atcctgtcttgcaattattcttcaaagataatcgaacctatccagtcaagatgtgctgtt
taccgattccgtcaccttactgaagattctgtagctgaaaggtgcaggcatattgcagaa
aaggaaggtctctcaattgctgaagatggtatggatgcattgaagtatgttgcccagggt
gacatgagaaaagcaataaatgctcttcaggcagcagctctttttgataaaacgatccac
aaggatgctatatacaggataactgcaacagctcatccggaagagatcatggaactgctc
aagactgcactatccggtaattttgtactggcacgcaaaaaacttgatgttttgatgctg
gaaaaaggtctttcaggagaagatgtcgtcgggcagatatatcgcgctatctttgatatg
gatgtgtccggtcagcgtatggttgatcttatggatatgatcggagaagttgatttcagg
cttactgaaggtgccaacgaaagaatacagcttgatgctttgctggcacattttgcgttg
acaaaggagtaa

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