Methanococcoides orientis: J7W08_08965
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Entry
J7W08_08965 CDS
T08012
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
melo
Methanococcoides orientis
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
melo03400
]
J7W08_08965
DNA repair and recombination proteins [BR:
melo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J7W08_08965
Archaeal homologous recombinant proteins
J7W08_08965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
AAA_21
AAA_27
AAA_16
DUF7351
Nuf2_DHR10-like
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UGV40221
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All DBs
Position
1843973..1846639
Genome browser
AA seq
888 aa
AA seq
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MKLKRVRVENIRSYKDLDISFEDGVTVVSGVNGSGKSSLLEACFTGLFGSRTLSKEFVLS
DLIRKGATKASILVDFDNKGHEYNIEQGYKINPRTGSASNNKSVFKIDGDIMVDQASQTY
EAVKALLKMDEEAYKNCVYIRQGEVDVLINAKTKDRQRMIDDLLQIGKLEEYRERAGSAR
KGVGRHQRETDARIKDNVADIENIESSNPYQVLNTVKTEMNETGAKITDFESKKERARGI
VESIGEKISKYTETQEQKKAIDLEIKGFKSKITTTYSEIERSRNLVGSGRQEVQQLKSAT
ADLSKQINVPEDADIEIYSVSIEKEEVSARDVVSSIVKKRELAQSSERSQNEFLLNLNEQ
VKTTSIAIQNKEAKIKTIQEDIERLSAESRKLDDENANRSKEASELGFPADKLENIEDIA
ELLSMKQKQLHGKERERSATLAELEKRVKKSKELLDKGLCPTCGQDLKGSKICEETAVDE
EQKAEMLAELQSIRSEQAEVETKVERVRKAKEIAKRIVENDHLTQIKKKDIAANEKLIEE
NHRTIREERKKESGLKEQITEVTISIRKIREDIISLGKDETAARDSHKVVKEKLDVARNI
RTNQLEISKVQNDIQRLQDGINNGLEKVGLFEEQIKDRKQRLDHLEKVLGDVNIDKLQTE
KMQYESAYKNIVSELERSNLRIKELHKEVGRVEGEIKRLNELKQKHKLLTNKKEFLAAVY
NDAEELETMYIRLRAELRAKNIDALDRLLNEIFSFMYTNNAYSHIKLDQEYNLTIYEKDG
TALEPKLLSGGERAIFNLVLRCAIYRLLSHSPGTTGSSELPPLILDEPTVFLDRGHIHQL
IKLIDMMRDIGVGQILIVSHDESLIDSADHVFVVEKDPITNSSSISAK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgaaaagggtacgtgttgagaacattagaagctacaaagaccttgacataagc
tttgaagatggagttaccgtggtatccggtgtgaacgggagcggtaaatccagcctgctg
gaagcatgtttcacaggacttttcggtagccgcaccctttcaaaggaattcgtgctttcc
gaccttatccgcaagggtgcaacaaaggcatccattctggtcgattttgataacaaagga
catgagtacaacattgagcaggggtacaagataaatcccaggaccggaagtgcatccaac
aacaagtcggtattcaagatcgacggggatatcatggtcgaccaggccagccagacctat
gaagctgtaaaagcacttctgaaaatggacgaggaagcctacaagaactgcgtgtacatc
cgccagggagaggtcgatgtattgatcaatgcaaagacaaaggaccggcagcggatgatc
gatgacctgctccagatagggaaactggaagagtacagggagcgtgcaggtagtgcgagg
aaaggtgtgggaagacatcagagagaaacagacgctcgcatcaaggacaacgttgcagat
attgaaaatattgaaagctccaacccataccaggtgctcaatacagtcaaaactgagatg
aatgagaccggagcgaaaattactgattttgagtctaagaaagagcgtgccagaggaatt
gtggaatccattggggagaagataagcaaatacacagaaacccaggagcaaaagaaagcg
atcgatcttgagataaaaggcttcaagtcaaagataacgacaacatacagtgaaattgag
agatccaggaaccttgttggttccggcaggcaggaagtccagcagcttaaaagtgcaact
gccgacctttccaaacagataaatgttccagaagatgctgatattgagatttatagtgta
tccatagagaaagaggaggtcagtgcccgggatgttgtcagcagcattgtcaaaaagagg
gaactggcacaaagcagtgagcgatcgcagaatgaattcctccttaacctgaatgaacag
gtaaagacgacatccattgccatacagaataaggaagccaagatcaaaaccattcaggaa
gatattgaaaggctttctgcagaaagcaggaaactggatgatgagaacgctaacagatca
aaggaagcctctgaacttggattccctgctgataaacttgaaaatatagaggatattgct
gaacttctgagcatgaagcaaaaacagcttcacggaaaggaaagggaaaggtctgccacc
cttgcagagcttgagaaaagggtgaagaaatccaaggagctactggacaagggactgtgc
cccacctgcggacaggaccttaaaggctcaaagatatgcgaagaaacagcagtggatgaa
gaacaaaaggccgagatgttggccgagctccagagcatacgttccgaacaggcagaagtg
gaaacaaaagtggaacgtgtcaggaaagcaaaggaaattgcaaaaaggatcgtagagaac
gatcacctgacccagataaagaagaaagacatcgctgccaatgagaagctgatcgaagag
aaccacaggaccatcagggaagagaggaagaaggaaagtggtcttaaagagcagatcact
gaggtcacgatatcgatcaggaagatcagggaagatattatttccctgggaaaagatgaa
actgctgcgagggattctcacaaagttgtaaaagagaagctcgatgttgcaagaaatata
cgaactaaccagcttgagatcagtaaggtccagaatgacatacaacggttacaggacggg
atcaataacgggctggaaaaggtcggactgttcgaggagcagataaaggataggaagcag
cgtcttgaccacctggaaaaggtacttggcgatgtcaatatagataagctccagaccgaa
aagatgcagtacgaaagtgcgtacaaaaatatcgtttccgaactggaaagatcgaacctg
aggataaaggagcttcacaaggaagtggggcgcgtcgaaggagagatcaagaggcttaat
gaacttaagcaaaagcacaagttgcttaccaataagaaggagtttctggcagccgtttac
aatgacgcggaagagcttgagaccatgtacatacgactgcgtgctgaactgcgtgcaaag
aatattgatgcgcttgacaggttactcaatgagatattctctttcatgtacaccaacaat
gcatactcgcacatcaagcttgaccaggaatacaatcttaccatctatgaaaaggatggc
actgcccttgaaccaaaattgttgagcggaggcgagagagcgatattcaaccttgtgctg
aggtgcgctatctatcgtttattgtcacattcacccggaactacaggcagttcagagctc
ccaccgctgatactggacgagcccaccgtgttccttgatcgcggacacatccatcagctg
ataaaacttatcgacatgatgcgggacatcggtgttggacagatcctgatagtatcacac
gatgaatcactgatcgattctgcagaccatgtgttcgtagttgagaaagaccccatcaca
aatagttcttccatttccgcaaaatga
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