Methanococcoides orientis: J7W08_08990
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Entry
J7W08_08990 CDS
T08012
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
melo
Methanococcoides orientis
Pathway
melo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J7W08_08990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
melo03000
]
J7W08_08990
03021 Transcription machinery [BR:
melo03021
]
J7W08_08990
Transcription factors [BR:
melo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
J7W08_08990
Transcription machinery [BR:
melo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
J7W08_08990
RNA polymerase III system
TFIIIB
J7W08_08990
RNA polymerase I system
SL1/TIF-1B
J7W08_08990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
UGV40225
LinkDB
All DBs
Position
1853124..1853675
Genome browser
AA seq
183 aa
AA seq
DB search
MTEYNIKIENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGDMAKKLNGIGIDTLAEPEITVQNIVASADLKAVLNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPENCEEGVEVVRQQLDNM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatataatatcaagatagagaacgtggttgcgtcaaccaaacttgctgaagaa
ttcgaccttacaaagatagaagcggaattcgaaggcgcagaatacaacaaacagaagttc
ccgggacttgtatatcgcgtttccgatccaaaagctgcattccttgtattcacatccgga
aaagtagtatgtacaggtgcaaagaacgtcgcagacgtacacacagtcatcggagatatg
gcaaagaagctcaatggcatcgggatcgacacccttgctgaaccggagatcacagtacag
aacatcgttgcttcagctgaccttaaagcagtgctcaaccttaatgcaattgctatcgga
ctcggtcttgagaacatcgagtacgagccagaacagttcccaggtcttgtttacaggatc
gatgaaccaaaggttgtcgtactgatcttcagttccggaaaacttgtggtcacaggtgga
aaatcccctgagaactgcgaggaaggagtcgaggtcgtaagacagcaacttgacaatatg
ggacttttgtaa
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