Methanococcoides orientis: J7W08_09775
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Entry
J7W08_09775 CDS
T08012
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
melo
Methanococcoides orientis
Pathway
melo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
J7W08_09775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
melo03019
]
J7W08_09775
03009 Ribosome biogenesis [BR:
melo03009
]
J7W08_09775
04131 Membrane trafficking [BR:
melo04131
]
J7W08_09775
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
melo04147
]
J7W08_09775
Messenger RNA biogenesis [BR:
melo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
J7W08_09775
Ribosome biogenesis [BR:
melo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
J7W08_09775
Membrane trafficking [BR:
melo04131
]
SNARE
SNARE associated proteins
Others
J7W08_09775
Autophagy
Aggrephagy
Other aggrephagy associated proteins
J7W08_09775
Exosome [BR:
melo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J7W08_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
TIP49
AAA_22
AAA_14
AAA_5
nSTAND3
AAA_33
NPHP3_N
Sigma54_activat
AAA_28
Mg_chelatase
RNA_helicase
ATPase_2
IstB_IS21
DUF815
AAA_7
AAA_24
AAA_3
AAA_18
Parvo_NS1
ATP-synt_ab
ABC_tran
Zeta_toxin
Sigma54_activ_2
AAA_30
AAA_17
AAA_25
NB-ARC
PhoH
AAA_19
Vps4_C
KAP_NTPase
Proteasome
Motif
Other DBs
NCBI-ProteinID:
UGV40359
LinkDB
All DBs
Position
2004476..2006674
Genome browser
AA seq
732 aa
AA seq
DB search
MSEDLIVRVAEANHRDAGRGIARLSNALMQRIGAVSGDIIEIKNKKKTYARVLPANLDDD
GEEIIRIDGNLRSNASVGIDDQVTVRRVIEKEAEKITLAPTRAFAQERLSRSIHRNLEGR
PLERGQRIRIETVNNPLNFIVKSTVPPGPVVVGRTTHIIMDKPIAETDINEGVSYEDIGG
LKRELGLMREMIELPLRHPELFDKLGVDPPKGVLLYGPPGTGKTMIAKAVASESEANFIP
ISGPEIISKYYGESEQKLREIFENAEKEGPSIIFIDEIDSIAPKRDDVVGEVERRVVAQL
LSLMDGLKSRGKVIVIAATNRPNSIDQALRRGGRFDREIEIGIPDRGGRLQILYVHTRGM
PIEKSMRLDMIADMTHGFVGADLSSLCKEAAMHALRRMLPMISIEEEIPAEIMEQLEVTE
ADFIEAHRNIEPSALREVFVEVPHVMWDDIGGLEQAKQELIEAVEWPLKYPEMFKSLNTS
PPRGILLFGPPGTGKTLLAKAVANESEANFISIKGPELLSKYVGESEKAVRETFRKAKQA
APTVIFFDELDSMVPKRGMGLESQVTERVVSQILTEIDGIEEMKDIVVVAATNRPDIIDP
ALLRPGRFDRLIYVKAPEREERIKIFNIHLAGKPLSDDISPSELADMTQGYVGADIEAVC
REAAMMALRENIKPKMTKEEAYEAAGRIVLQTSHFRKAMSRIRPSTSKSEMEMYVETACM
FSRSSGSEENED
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaccttattgttcgtgttgcagaagcaaaccaccgtgatgcaggcagaggc
atcgccagactttccaatgcgcttatgcaaagaattggtgcagtaagtggggacatcatc
gagataaagaataaaaagaagacctatgcaagggtcctgccggcaaaccttgatgatgat
ggggaagagatcatccgcatcgacggcaacctgagaagtaatgcaagtgttggcatcgac
gaccaggtaactgtcaggagagttattgaaaaggaagccgaaaaaataactcttgcaccc
acccgagccttcgcccaggaaaggctttcacgctcaatacaccgtaatctggaagggcgc
cctctggaaagaggacagcgtatcaggatagagaccgttaacaatcctcttaactttatt
gtcaagtcaacagtacccccgggtcccgttgttgtaggtcgtacaacccacatcataatg
gacaagccaattgctgaaacagatatcaatgaaggggtgtcctatgaggatatcggcggc
ttgaaacgtgaactggggctgatgcgcgagatgatagaacttcctctgcgccatccggaa
ctttttgacaagctcggtgttgatcctccaaaaggagtactgctctacggccctcccggc
acaggcaagacaatgatagcaaaagcggttgccagtgagagtgaagcaaacttcataccg
atcagcggccctgagatcatatccaaatactacggcgagagcgagcagaagctccgcgag
atcttcgaaaacgcggaaaaggaaggaccttccatcatcttcatcgacgagatagattcc
atcgcaccaaagcgtgatgacgttgtcggagaagtggaaagaagagttgtagctcagctg
ctctcactgatggacggattgaagagcagaggaaaagttatagttatagcagccacgaac
cgcccgaattccattgaccaggcattgcgccgaggtggccggttcgaccgtgagatcgaa
atagggatcccggacaggggcgggcggctgcagatactctacgtccatacccgtggaatg
cctatagaaaagagcatgcgtcttgatatgatagccgatatgacccatggttttgtagga
gcagacctgtcatccttatgcaaggaagcagcaatgcatgcccttcgcaggatgctcccc
atgatcagcatagaggaggagatcccagccgagataatggaacagctggaggtcactgaa
gctgattttatcgaagcgcaccggaacatcgaaccatctgcactcagggaagtgttcgta
gaggtcccgcatgtcatgtgggatgacatcggtggactggaacaggcaaaacaggaactc
atcgaagctgtggaatggcctctgaaatacccggagatgttcaaaagcctgaacaccagc
ccgccaagaggcatactgcttttcggaccacctggaacaggaaagacacttctggcaaag
gctgttgcaaacgaaagtgaggctaatttcatcagtataaagggaccagaacttctcagc
aagtacgttggagaatccgagaaagcggtccgtgaaacattcaggaaagccaaacaggca
gctccaacggttattttctttgatgagcttgactccatggtcccaaaaaggggaatgggg
cttgaatcacaggtaactgaacgtgttgtcagccagatacttaccgagattgatggtata
gaggaaatgaaggacattgtggtcgttgccgccacgaaccgtccggacataatcgatcct
gcacttttaagaccgggacgttttgacaggcttatctatgtaaaagcacctgaaagggag
gagcgtatcaagatctttaacatccatcttgccggcaaacctctttcagatgatatcagc
ccttccgaacttgctgatatgacacaaggttatgttggtgcagatatcgaagcggtttgc
agggaagctgcaatgatggcattaagagagaacatcaaaccgaaaatgacaaaggaagaa
gcttatgaagcagccggaagaatagtgcttcaaacatcacatttcaggaaagcaatgtca
cgcatcagaccctctacatcaaaaagtgagatggagatgtatgtagaaaccgcctgcatg
ttctcaagatcatcaggatcggaagagaatgaagactga
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