Methanococcoides orientis: J7W08_10065
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Entry
J7W08_10065 CDS
T08012
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
melo
Methanococcoides orientis
Pathway
melo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
J7W08_10065 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
melo03019
]
J7W08_10065 (prf1)
03012 Translation factors [BR:
melo03012
]
J7W08_10065 (prf1)
Messenger RNA biogenesis [BR:
melo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
J7W08_10065 (prf1)
Translation factors [BR:
melo03012
]
Eukaryotic type
Release factors
J7W08_10065 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF4931_C
HypA
Zn_ribbon_LysW
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UGV40407
LinkDB
All DBs
Position
2068589..2069833
Genome browser
AA seq
414 aa
AA seq
DB search
MVDQSSHQKYEFKKKLESLRGKRGRGTELISLYIPPDKQLSDVVAQLKTEHGQASNIKSK
LTKTNVQGAIESIMSRLRYVTVPENGIVYFTGAVDVGANKTNMESTIIEPPQPIITYRYH
CDSSFYLDPLEEMLREAKTYGLLVLDRREASIGLLVGKHIEPYRNLTSTVPGKQRKGGQS
AHRFQQLRLIAIHDFYKRIGDAASEVFLTVDQKDFEGVLVGGPSPTKEEFESGHFLHHEI
EKKMLGLFDVAYTDESGLPELVNAASERLEDLDLMVEKKLMQQFFRELVSDSGKATYGED
NVRENLIIGAVDIMLVSEDLRAERMTVRCTSCDYEKKTTSDFKPGDSKTSLGNCPKCGSY
LEVVEKVDVVDELSEMCDQMSTTVEFISTDFEEGAQLLNAFGGIVAILRFNTGI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggttgaccaatcttcacatcaaaaatacgagtttaaaaagaaacttgaatcgttaagg
ggcaagcgaggtcgtggtactgagcttatctcattgtacattccacctgacaagcagctc
tcagatgtagttgcacagctcaagacagagcacggtcaggcctccaacatcaagtccaaa
cttaccaagacgaatgtgcagggtgctatcgaatccatcatgtccagactcaggtatgtg
accgttcctgagaatgggatcgtctatttcacaggtgctgttgatgtcggagctaacaag
actaacatggagtcaaccatcattgagcctccacagccaattataacatacaggtatcac
tgtgattcatcattctaccttgatcctctagaggagatgttaagagaagcaaagacctat
ggtctgctcgttcttgacaggcgtgaagcctcaattggtcttcttgtgggcaagcacata
gaaccatatcggaacctgacctcaactgtaccgggaaaacagaggaaaggaggacagagt
gcccacaggttccagcaacttagactcattgccatacatgatttctacaagcgtatcggt
gatgcagcaagtgaggtcttcctcacagttgaccagaaggactttgaaggtgtgcttgtt
ggtggtccttcaccaacaaaagaagagttcgaatccggtcatttcctccaccacgagata
gagaagaaaatgctcgggcttttcgatgtggcatatacagatgagtctggtcttccagaa
cttgtgaacgcagcaagtgaaaggcttgaggaccttgatctcatggtagagaagaaactg
atgcagcagttcttcagggaactggtgtctgattcaggcaaagcgacctatggtgaggac
aatgtacgagagaacctcattatcggtgctgtcgatataatgctcgtatcagaagacctg
agggctgaaaggatgaccgtcaggtgtacttcttgcgattatgagaaaaagacaaccagt
gatttcaagcctggtgattcgaagacaagtcttggtaactgcccgaaatgtggttcctat
cttgaggtagtggaaaaggtcgatgttgttgatgaactatccgaaatgtgtgaccagatg
agtaccacggtagagttcatttccactgactttgaagagggtgcacagcttctgaacgct
tttggtggtatcgtcgctatcctgcgtttcaacacaggcatctga
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