Methanococcoides orientis: J7W08_10910
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Entry
J7W08_10910 CDS
T08012
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
melo
Methanococcoides orientis
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
J7W08_10910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
melo03021
]
J7W08_10910
03019 Messenger RNA biogenesis [BR:
melo03019
]
J7W08_10910
Transcription machinery [BR:
melo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
J7W08_10910
RNA polymerase I system
J7W08_10910
Messenger RNA biogenesis [BR:
melo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
J7W08_10910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Motif
Other DBs
NCBI-ProteinID:
UGV40555
LinkDB
All DBs
Position
2238163..2238621
Genome browser
AA seq
152 aa
AA seq
DB search
MSEDAAIFVVKTTANQERSVAGMLAQVARKDNLDIRAIIAPDELKGYVLLESSDSGAVEQ
AIQTVPHARTVVKGQSSIAEIEHFLTPKPTVTGIVEGAIIEVTSGPFKGEKARVKRVDEG
HEEITVELFDAVVPIPITIRGDTVRILRKEES
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagatgccgctatatttgttgttaagacaactgctaatcaagagcgttcagtt
gccgggatgttggctcaggttgccagaaaggacaatctcgacataagagctataattgct
ccggatgagcttaaaggctatgtacttctggaatcgtccgattccggtgctgtagaacag
gctattcagacggttcctcatgcaaggaccgttgttaaaggccagtccagtatagcggag
atcgaacatttccttacaccaaaaccaaccgtcacaggtattgtggaaggtgcgatcatc
gaggtaacctccggtcctttcaagggcgaaaaggcacgtgtaaagcgtgttgatgagggt
cacgaggaaatcacggtcgagctgttcgatgctgttgtaccaatacctataactatacgt
ggtgatactgtacggatactcaggaaggaagaatcctga
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