Methanococcoides orientis: J7W08_11355
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Entry
J7W08_11355 CDS
T08012
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
melo
Methanococcoides orientis
Pathway
melo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
melo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
J7W08_11355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
melo03019
]
J7W08_11355
03009 Ribosome biogenesis [BR:
melo03009
]
J7W08_11355
04131 Membrane trafficking [BR:
melo04131
]
J7W08_11355
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
melo04147
]
J7W08_11355
Messenger RNA biogenesis [BR:
melo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
J7W08_11355
Ribosome biogenesis [BR:
melo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
J7W08_11355
Membrane trafficking [BR:
melo04131
]
SNARE
SNARE associated proteins
Others
J7W08_11355
Autophagy
Aggrephagy
Other aggrephagy associated proteins
J7W08_11355
Exosome [BR:
melo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J7W08_11355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_5
CDC48_2
AAA_16
AAA_2
AAA_14
AAA_22
TIP49
AAA_7
AAA_33
AAA_25
nSTAND3
AAA_28
ATPase
Mg_chelatase
IstB_IS21
RNA_helicase
Sigma54_activat
AAA_24
NPHP3_N
DUF5906
Parvo_NS1
AAA_17
AAA_18
ABC_tran
Zeta_toxin
PhoH
AAA_3
NB-ARC
AAA_lid_PRS2_C
bpMoxR
Bac_DnaA
AAA_11
DUF815
ResIII
ATP-synt_ab
IPT
AFG1_ATPase
Sbi-IV
Motif
Other DBs
NCBI-ProteinID:
UGV40633
LinkDB
All DBs
Position
complement(2329407..2331623)
Genome browser
AA seq
738 aa
AA seq
DB search
MEELQIKVEKAHPIDFGRGIIRLDPSTLLSLQLSPGDIVEIEGKKTTAAKVWRADRQDWG
QGIGRIDGFTRQNAGVGIGERAFIKRAEVTPAEKVVLAPPEGITMEFGTNIQAIIKHNIL
KQPFVAGDVIPITSSMTQPTPGNQAIPLVAIETTPEEGILIITENTEIELRQKPAKGYED
AARGIAYEDIGGLGDEIQRVREMIELPLKHHEIFQRLNIEPPKGVILYGPPGTGKTLIAK
AVAGESRANFHYIAGPEIMGRFYGESEERLRKIFEEAAENAPSIIFIDEIDSIAPKRENV
TGEVERRVVAQLLTLMDGMEERGQIVVIGATNRVDSIDPALRRPGRFDREIEIGVPDSDD
RLEILQIHTRGMPLSEDVELEYFADHTQGFVGADLLSLVQEASMRSLRRIIPEINLDEEE
IPDEVLEKLIVTTEDLEDALTEVEPSAMREVLVEIPSIKWDDVGGLDEAKQEIVEAVEWP
LKRPDRIMEMGIKAPKGILLYGPPGTGKTLMAQAVANESNANFISIKGPQMISKFVGESE
KAIRETFKKARQVSPCIIFFDEIDSIATTRMADSETGRASQQVVNQLLTELDGLEALKEV
VVIAATNRPDMIDPALMRSGRFDRLVLVGNSTMEGRENIFNIHTRNIPLDSEVSISELAA
MTEGYVGADIEAVCREAVMLALRENFETESVKKSHFLAAMGKVKPTITEDMAEFYGKMQE
KLKGSTHKQETSSYMGYM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactacagatcaaagtagaaaaagcacacccgatcgatttcgggcgtggaatc
ataaggcttgatccgagcactttactcagcttgcaactttcgccaggggatatcgttgag
atagaaggcaagaaaacaacggctgcaaaggtctggcgtgcagacagacaggactgggga
cagggaattggtcgcatcgacggattcacccggcagaatgccggcgttggcataggggaa
agggcctttatcaaaagggcagaagtcacccctgcggagaaggtagtacttgcacctccc
gaaggaattacaatggaattcgggacaaacatccaagccattatcaaacataatatcctg
aaacaaccctttgttgcaggtgatgtcattccgataacaagttcgatgacacagccaaca
ccgggtaaccaggcaatacctcttgttgctatcgagacaacacctgaagagggaatactt
atcattactgaaaatacggagatcgaactgcgccagaaacctgcaaagggctatgaggac
gctgcccgcggtatcgcctatgaggatattggcggacttggtgatgagatccagagggta
cgcgagatgatcgagctgcccctcaagcaccatgagatcttccagcgtcttaatatcgag
cctccaaaaggagttatactgtacggcccgccaggcaccggaaagacgcttattgcaaaa
gccgttgcaggcgaatcaagggcaaatttccactacattgcgggaccggagatcatggga
aggttctacggagaaagtgaggaacgcctgagaaagatattcgaggaagctgcagagaat
gcaccttctattatattcatagatgagatcgactccatcgcaccaaagcgtgagaacgta
accggggaagtggagcgcagggtggttgcccagctgctcacacttatggacggtatggaa
gagaggggacagatcgtagttatcggtgccaccaaccgtgtggattccattgatcctgca
ctgcgcaggccgggaagattcgacagggagatcgaaatcggcgtgcctgacagcgatgac
cgtctggagatcttgcagatccatacccgtggaatgccgctttcagaggatgttgagctt
gaatactttgcagatcacacccagggattcgtgggtgcagacctactttcacttgtacag
gaagcttccatgagatccttaagaaggatcataccggagatcaacctggacgaggaagag
atacccgacgaggtcctggagaaacttatagtcaccacagaggacctggaggatgccctt
acagaggtcgaaccttcagcaatgagggaagtgctggtagagataccttccattaaatgg
gatgatgtagggggtcttgatgaggcaaagcaggaaattgtggaagctgtggaatggcct
ctaaagcgtcctgacaggataatggagatgggcatcaaagcaccaaagggaatactcctt
tatggcccgccaggcaccggaaagacacttatggcacaagcagtggccaacgagtccaat
gcgaacttcatcagtatcaagggaccacagatgatctccaagttcgtgggagaatccgaa
aaggcgatccgtgagacattcaagaaggcaaggcaggtctcaccatgtatcatattcttc
gatgagatagactccattgcaactacccgtatggccgacagcgagaccggaagagcttca
cagcaagtggtgaaccaactgttgaccgaactggacggactggaagcactgaaagaagta
gtggtaattgcagctaccaacaggccggacatgatagaccctgcactgatgcgctcagga
aggttcgacaggctcgtccttgtgggtaactccacaatggaaggaagggagaacatattc
aacatacacacacgcaatatcccgctggacagcgaggtcagcatatcagagcttgcagcg
atgaccgaagggtatgtgggagctgatatcgaggctgtatgcagggaagctgtgatgctt
gcactgcgtgagaacttcgaaacggagtctgtgaaaaagagtcatttccttgcagcaatg
ggcaaggtcaagcctactatcaccgaggatatggctgaattctacggcaagatgcaggaa
aaactaaagggaagcacccataagcaagaaacaagttcttatatgggatatatgtaa
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