KEGG   Methanococcoides orientis: J7W08_12165
Entry
J7W08_12165       CDS       T08012                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
melo  Methanococcoides orientis
Pathway
melo03030  DNA replication
Brite
KEGG Orthology (KO) [BR:melo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J7W08_12165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:melo03032]
    J7W08_12165
DNA replication proteins [BR:melo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     J7W08_12165
SSDB
Motif
Pfam: AAA Rad17 RCF1-5-like_lid AAA_22 RuvB_N AAA_16 DNA_pol3_delta2 AAA_14 AAA_30 DUF815 nSTAND3 AAA_33 NACHT RNA_helicase AAA_lid_RFC1 IstB_IS21 AAA_5 TsaE AAA_7 AAA_28 nSTAND_NTPase5 SRP54 NPHP3_N AAA_6 RsgA_GTPase NB-ARC PPV_E1_C Viral_helicase1
Other DBs
NCBI-ProteinID: UGV40778
LinkDB
Position
complement(2489982..2491502)
AA seq 506 aa
MEESIEWVEKYRPKSLSDLVGNKKSVVDMREWAESWLSGVPEKRAVILHGPAGVGKTSAA
HALAKDFEWETIELNASDQRTAGAIERVAGSASKMSSLTGTSTKRLIILDEADNMHGNAD
RGGARAVGGIIKTTDQPIVLIANDLYGLTPSIRSSCIELKFNSVQARSMIPALKRICVEE
NIMCGVGVLEKLADNAGGDLRSAVKDLQAVALGRDEIYIEDIATSERDTKESIFKALGKI
FKSTDPKSALQATYGLDETPENLIHWIDENLPLQYGTQEGTEEDIITGYRYLSKADRYLG
RVRKRQSYRLWRYASVLMTCGTVVSKTHVSRGFTKYQPPSFWRKMGQLRAKRDMRDNIAS
RIGYHCNESMRYSRTDLAHLYGRMLKDDAYAVDVAVDLELSVDEIVYLTGGKKVTKGIQK
IYDLAQAQRSTYGNDDAPVFFEKKAVKKVQDKKQMDLNQIMESAASKGNSEAAETSKTVN
SVPKDDPKPDPKPAAKAKPQRTLFDF
NT seq 1521 nt   +upstreamnt  +downstreamnt
atggaagaatctatcgaatgggttgaaaaatacaggcccaaatccctatcagatcttgtg
gggaacaagaaatcagtcgttgatatgcgcgagtgggcagagtcatggctctccggtgtt
ccggaaaagcgtgcagtcatactccacggacctgcaggagttggaaagacatccgctgcg
cacgcacttgcaaaagacttcgagtgggagaccatcgagctgaatgcaagtgaccagcga
acagcaggtgctattgaaagggtcgcaggttcagcttcaaagatgagctcacttacggga
acttccacaaagagacttataattctggacgaagccgacaacatgcacggtaatgccgac
agaggcggagcacgtgctgtgggcggcattatcaaaacaactgaccagcccatcgtgctg
atcgccaacgacctttacggactaacaccttcgatacgctccagctgtattgagctcaag
ttcaattctgtgcaggcaagatcaatgataccggcgctcaagagaatatgcgtcgaagag
aatatcatgtgcggtgttggcgtccttgaaaaactggcagacaacgccggcggagacctt
cgaagtgctgtcaaggatcttcaggctgtggcattgggaagggatgagatctacattgaa
gacatcgcaacctccgaaagggacacgaaggaatcgatcttcaaggctctgggaaagatc
ttcaagagcacggacccaaaaagcgcattgcaggctacatacggtctggacgaaacacct
gagaacctcatccactggatcgatgagaacctgccattacaatatggcacccaggaaggg
accgaagaggatattatcacaggatacagatacctttcaaaggcagacaggtatctcggt
cgtgttagaaaacgacagagctatcgtctctggagatatgcaagcgtcctcatgacctgc
ggaacagtggtatctaagactcatgtcagtcgcgggttcacgaaataccagccaccctct
ttctggcgtaaaatgggtcagttaagggcaaaacgtgacatgagggataacattgcttcc
aggatcggctaccattgcaacgaatccatgcgttattcccgcacagacctggcacacctc
tacggcaggatgctgaaggacgatgcctatgcagtggatgtagctgtagaccttgagctg
agcgttgatgagatcgtctacctcacaggtggcaagaaggtcacaaaaggaatacagaag
atatatgatcttgcacaggcacagcgcagcacttatggcaatgacgacgctccggtcttt
tttgagaagaaagcggtgaagaaggtacaggataaaaagcagatggacctgaaccagata
atggaaagtgctgcttccaaaggaaattcagaagctgcagaaacttcgaagacagtgaac
tcagttccaaaggatgatccaaaaccagaccccaaaccggctgcaaaagcaaagcctcaa
agaaccttattcgacttctga

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