KEGG   Candidatus Methanoliparum sp. LAM-1: MTLP_01090
Entry
MTLP_01090        CDS       T07692                                 
Symbol
cas6
Name
(GenBank) CRISPR-associated endoribonuclease
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
melu  Candidatus Methanoliparum sp. LAM-1
Brite
KEGG Orthology (KO) [BR:melu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:melu02048]
    MTLP_01090 (cas6)
Prokaryotic defense system [BR:melu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    MTLP_01090 (cas6)
   Subtype I-D factors
    MTLP_01090 (cas6)
SSDB
Motif
Pfam: Cas_Cas6_C CRISPR_Cas6 Aegerolysin
Other DBs
NCBI-ProteinID: BDC35427
LinkDB
Position
complement(97035..97598)
AA seq 187 aa
MFTFSKLIGRYEIKNGTITFILPVKFIISSPLDRFVSELANTMLTSKLKLFGEDIYVEEM
EVLGKPEIKSRMEIRMMTPLVAYSTLITPEGRKKTYYYNPLEPEFAELIDRNLRKKHEAF
YGKKPRARKTSIKPIVFNERVLKYRDNVIKGYTGKFIIDGNKKLLELAYDCGLGSKNSQG
FGMFDPA
NT seq 564 nt   +upstreamnt  +downstreamnt
atgtttaccttttccaagcttataggcaggtatgagataaagaatggtacgataacattc
atactacctgtgaaatttataatctcaagccctctggaccgctttgtgagcgagcttgcc
aatacaatgctgaccagcaagcttaagttgtttggggaagatatatacgttgaagagatg
gaggttcttggaaagccagagataaagagcaggatggagataaggatgatgactcctctt
gttgcctacagtacgcttataacaccagaaggcaggaaaaaaacgtattactataatcct
ctggaacctgagtttgcggagctgatagacagaaacttgaggaaaaagcatgaagcattt
tacggcaaaaaaccgcgggcaagaaagacatctataaaacctatagtgttcaatgagagg
gtcttaaagtacagggataatgtgataaagggttatacaggaaagttcatcatagatggg
aataaaaagcttctagagcttgcatacgactgtggtttaggctcaaagaactcccagggc
ttcgggatgtttgatcctgcatga

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