Candidatus Methanoliparum sp. LAM-1: MTLP_01860
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Entry
MTLP_01860 CDS
T07692
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
melu
Candidatus Methanoliparum sp. LAM-1
Brite
KEGG Orthology (KO) [BR:
melu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MTLP_01860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
melu03021
]
MTLP_01860
03019 Messenger RNA biogenesis [BR:
melu03019
]
MTLP_01860
Transcription machinery [BR:
melu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MTLP_01860
RNA polymerase I system
MTLP_01860
Messenger RNA biogenesis [BR:
melu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
MTLP_01860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
KOW5_SPT5
SH3_KIN17_C
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-ProteinID:
BDC35504
LinkDB
All DBs
Position
complement(166311..166784)
Genome browser
AA seq
157 aa
AA seq
DB search
MSNVDLNIYIVKTVAGEERNVADMIMTKINTMDKTSIASILVPYGLKGYFMIEGGVLEEI
EEIVKGIPHAKGIIKGSVPLSEIEPFLMPQPSAAKVKIGDIVEIINGPFKGEKAKVKKVD
INKEEITVEFFESMVIIPVTVKGSSIRVIDSDTEDKK
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtcgatttaaatatatatatagtaaagacggttgcaggagaagagagaaac
gtggctgatatgataatgaccaagataaatacaatggacaagacaagtattgcatctatt
ttagtgccttatggattaaaaggctattttatgattgaaggaggagtattggaggagatt
gaagaaattgtcaagggtataccgcatgcaaaaggtattataaaaggaagcgtcccgtta
tcagagatcgaaccatttttgatgccacagccttctgctgcaaaggttaagataggtgat
attgtagagataataaacggcccgtttaaaggggagaaagcaaaagttaaaaaggttgat
attaacaaagaagaaataactgtagaattttttgaatcgatggtgataatccctgtaaca
gtaaaaggtagttctattagagtaatagattcagatacggaggataaaaaatga
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