Candidatus Methanoliparum sp. LAM-1: MTLP_05910
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Entry
MTLP_05910 CDS
T07692
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
melu
Candidatus Methanoliparum sp. LAM-1
Brite
KEGG Orthology (KO) [BR:
melu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
melu03016
]
MTLP_05910
Enzymes [BR:
melu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MTLP_05910
Transfer RNA biogenesis [BR:
melu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MTLP_05910
Prokaryotic type
MTLP_05910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BDC35909
LinkDB
All DBs
Position
complement(535655..536947)
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AA seq
430 aa
AA seq
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MIPTPYSIEKEVGIDYYLTDTKGIGGRIKTVPNDFVVEEIYDPEKILKIVSNRINKIYSI
ILVKKLNWDTHTLVREIARRLGISKKRIGFSGTKDKNALSIQLMSCDVTKESIEKIKIKD
ADIKFVGYSTSPVKLGNHIANRFKITIRDINHESDICDTVAEIEREVDDKGGFPNFFGMQ
RFGTIRPISHKIGEKILKRDFKGAVLTYLSYENNYEPEDTRYARRYAKEEDFKNALRYFP
HHLRYERALANHLVRYPEDYIGALRDIQLGVRMMFIHAYQSYLFNKIVSKRIEEGIFNRV
IEGDYVYFKNGGIDKVNLNKVKLYENLIDKGRSSITAPLIGYNSVLNDFELKVIEESEEI
KGEDLIRSFKIKELPELSSKGIRRPISIKAHITSSKIDDALSLNFLLDKGSYATSILREI
MKEDPLKANF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaacaccatacagtatagagaaagaggtcggtatagactattatctaacggat
acgaaaggtatcggtggtaggataaagaccgtacctaacgattttgtagtcgaggagata
tacgatccagagaagattttaaagattgtatcaaacagaataaacaagatttattctata
attttagtaaaaaagttaaactgggatactcatacgttggtgagagagatcgcacgccga
ttaggaataagtaaaaagagaataggcttttctgggactaaggataagaatgcgttatcc
atacaacttatgagttgtgatgttacaaaagagagtatagaaaaaatcaagataaaagat
gcggatataaaatttgtcggttattcaaccagcccggtaaagttaggtaaccatattgcg
aatcgattcaagataacgataagagatattaaccacgaatcggatatatgtgatacagta
gcagagatcgaaagagaggtagacgataaaggtggttttccaaatttttttggtatgcag
aggttcggtacgatacgcccgatctctcataaaattggagaaaaaatacttaaaagagat
tttaaaggagcagtactgacttatttatcttatgaaaacaattacgaaccggaagataca
agatatgcaagaagatacgcaaaagaagaagattttaagaatgccttgagatattttcca
catcatctgcgatacgaaagagcactggcaaaccatcttgtaagatatcctgaagattat
ataggtgcgttgagagatatacagttaggcgtacggatgatgtttatacatgcataccag
tcttatttgttcaacaagatcgtgagcaagcgtatagaagaagggatatttaacagggtt
atagaaggagattatgtatatttcaaaaatggtggcatagacaaagttaatctgaataaa
gtaaaattatacgaaaatttgatagataaaggaagatcaagcattactgctccattaata
gggtataatagcgttctgaacgatttcgaacttaaagtgatagaggagtcggaagaaatt
aaaggagaagatttgataagatcgtttaagataaaagaattgccagaattatcttcaaaa
gggataaggcgtcctatatctataaaagctcatataacttccagtaaaatagatgatgct
ctatcactaaactttttgttggataaaggaagctatgcaacgtctatattgagagagata
atgaaagaagatccattaaaggctaatttttaa
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