KEGG   Candidatus Methanoliparum sp. LAM-1: MTLP_08410
Entry
MTLP_08410        CDS       T07692                                 
Name
(GenBank) DNA polymerase III sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
melu  Candidatus Methanoliparum sp. LAM-1
Pathway
melu03030  DNA replication
melu03410  Base excision repair
melu03420  Nucleotide excision repair
melu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:melu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MTLP_08410
   03410 Base excision repair
    MTLP_08410
   03420 Nucleotide excision repair
    MTLP_08410
   03430 Mismatch repair
    MTLP_08410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:melu03032]
    MTLP_08410
   03400 DNA repair and recombination proteins [BR:melu03400]
    MTLP_08410
DNA replication proteins [BR:melu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MTLP_08410
DNA repair and recombination proteins [BR:melu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MTLP_08410
   MMR (mismatch excision repair)
    Other MMR factors
     MTLP_08410
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MTLP_08410
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 DHOR
Other DBs
NCBI-ProteinID: BDC36159
LinkDB
Position
772745..773494
AA seq 249 aa
MFKALINGDVIKNALMGVSILSNDVKMNFNDEGIYIKAVDDANVCMVSLNLKKDDFDYFD
ASSSSIGLNIKTAYDLLKDAKKGEPIEIELLEKDSKIKFSMGNLSYSLVLLNIDAIKKEP
KTPKIDLPVEAVINGEDFKKAVKAAEKISDYIIFNADNEGLKISSKGNMRDMFLSIPKEE
LMKYSIKEGNSVRSMFSLEYVSEIAKVFTNQEDVELHIGNDFPILMKSNIAKHEGFIEYL
LAPRVEEGY
NT seq 750 nt   +upstreamnt  +downstreamnt
atgtttaaggcattaataaatggtgatgtaataaagaacgcacttatgggtgtatcaata
ctatctaacgatgttaagatgaatttcaatgatgaggggatatatatcaaagccgtagat
gatgcaaacgtatgtatggtatctttaaatttaaaaaaggatgattttgactattttgat
gcatcatcttcatcaatcggtctaaacattaaaactgcgtatgatttactgaaagatgca
aaaaagggtgaaccaatagagatagaacttttagaaaaagatagcaagataaaattttct
atgggcaatctgagttattccctcgtgcttttgaatatagatgctataaaaaaagagcct
aagactcctaagatagatcttcctgttgaagcagttatcaatggagaagattttaaaaaa
gcagtaaaagcagcagagaagatcagtgattacataatcttcaatgcagataacgaagga
ttaaagattagtagtaaaggaaatatgcgtgatatgtttttatccattccgaaggaagag
ttgatgaagtattctataaaagagggtaatagtgttagatcgatgttttctctagaatat
gtatcagaaatcgctaaagtatttacaaatcaagaagacgtggaattacatatcggtaac
gatttccctatactgatgaaatctaatattgccaaacatgaaggattcatagagtatcta
ttagcaccaagagtagaagaaggctattga

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