Microbacterium elymi: L2X98_22560
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Entry
L2X98_22560 CDS
T09210
Name
(GenBank) hypothetical protein
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mely
Microbacterium elymi
Pathway
mely03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mely00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L2X98_22560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mely03021
]
L2X98_22560
03400 DNA repair and recombination proteins [BR:
mely03400
]
L2X98_22560
Enzymes [BR:
mely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L2X98_22560
Transcription machinery [BR:
mely03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L2X98_22560
DNA repair and recombination proteins [BR:
mely03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L2X98_22560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
UUT36541
UniProt:
A0ABY5NN49
LinkDB
All DBs
Position
complement(1017611..1019746)
Genome browser
AA seq
711 aa
AA seq
DB search
MIIGLHHLTTVKAGASGEGRVFGSVAEAIMARDEGTLDLQAKARIRIPELTFLEGEAPEN
YERYGLVDASLGQVIFNDTLPKGFPFVRGQADKGKLSQIVNKLAEEYPKVTVAAALDAIK
DAGFYWATRSGVTVALSDVITPPNKAEIVGQYEKQAAKVQGQYEKGLTTDAERRQELIKI
WTEATDEIQKAMRDNFPEDNTINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPII
SSYREGLSVAEYFIASHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTNKGL
EFTIAAPGADGTLVRDSNVENSVFARTLATDVVTDGGEVLAEAGQDVGDVLINRLVEAGV
QTIKVRSVLTCDSAVGVCARCYGRSLATGKMVDIGEAVGIIAAQSIGEPGTQLTMRTFHT
GGSASAEDITQGLPRVQELFEARTPKGASPIAESDGRITIDETEKSRKVILTPDNGDEPH
VYPVLRRATLLVEDGQHVSVGQPLLVGTLDPKEIMRVQGARTVQKYLVDGVQGVYRSQGV
PIHDKHIEVIVRQMLRKVTVVDHGDTKLLPGELVDSRRFIDMNRGAVAEGKRPASGRPEL
MGITKASLATESWLSAASFQETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLSKY
RNVVVEATEEAKSERYPNRIFASDGAYSDTDLSYVDFDSFSTDDFTPGQYN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcggcctgcaccacctgaccacggtcaaggcgggcgcgagcggcgagggccgc
gtgttcgggtcggtcgccgaggcgatcatggcccgcgacgagggcacgctcgacctgcag
gcgaaggcgcgcatccgcatcccggagctcaccttcctcgagggtgaggcgcccgagaac
tacgagcgctacgggctggtggatgcctcgctcggccaggtgatcttcaacgacaccctg
ccgaagggcttcccgttcgtgcgcggccaggccgacaagggcaagctgagccagatcgtg
aacaagctggcggaggagtaccccaaggtcaccgtcgccgccgcgctggatgcgatcaag
gacgccggcttctactgggccacccgttcgggcgtgaccgtcgccctctccgacgtgatc
accccgccgaacaaggccgagatcgtcgggcagtacgagaagcaggccgcgaaggtccag
ggccagtacgagaagggtctgaccaccgacgccgagcgtcggcaggagctcatcaagatc
tggaccgaggcgaccgacgagatccagaaggcgatgcgggacaacttccccgaggacaac
accatcaaccgcatggtgtcctccggcgcccgcggaaactggctccagatccggaacatc
gccggtatgcgaggcctcgtgaacaacccgaagggcgagatcatcccgcgcccgatcatc
tcctcgtaccgcgaggggctgagcgtggcggagtacttcatcgcctcgcacggtgcccgc
aagggcctggccgacaccgcgctgcgcacggccgactccgggtacctcacccggcgtctg
gtcgacgtctcgcaggatgtcatcatccgcgaggacgactgcggcacgaacaagggcctg
gagttcacgatcgccgcgcccggcgccgacggcaccctggtgcgtgacagcaacgtggag
aactcggtgttcgcccggacgctggccaccgacgtggtcaccgacggcggcgaggtcctc
gccgaggccggacaggatgtcggggacgtgctgatcaaccgtctggtcgaggcgggtgtg
cagaccatcaaggtgcggtcggtcctgacctgcgactcggcggtcggcgtctgcgcccgc
tgctacggccgctcgctggccaccggcaagatggtcgacatcggcgaggccgtgggcatc
atcgcggcccagtcgatcggcgagcccggcacccagctgaccatgcgcacgttccacacc
ggcggttccgcgtcggcggaggacatcacgcagggtctgccgcgtgtgcaggagctgttc
gaggcgcgcaccccgaagggtgcctcgccgatcgcggagtccgatggacgcatcacgatc
gacgagaccgagaagagccgcaaggtcatcctgacccccgacaacggcgacgagccgcac
gtctacccggtcctgcggcgcgcgacgctgctggtcgaggacgggcagcacgtctcggtc
ggccagccgctgctcgtgggcacgctggacccgaaggagatcatgcgcgtccagggtgcg
cgcaccgtgcagaagtacctcgtggacggcgtccagggggtctaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcggaaggtcaccgtg
gtcgaccacggcgacacgaagctgctgcccggtgagctggtggactcgcgtcggttcatc
gacatgaaccgcggtgccgtggccgagggcaagcgcccggcctcgggtcgtcccgagctc
atgggcatcacgaaggcgtcgcttgcgaccgagtcgtggctgtcggccgcgtcgttccag
gagacgacgcgcgtgctgacccaggccgcgatggagggcaagagcgacccgctcgtgggc
ctgaaggagaacgtgatcatcggaaagctgatccccgccggcaccggactgtccaagtac
cggaacgtcgtggtggaggccaccgaagaggccaagagcgagcggtaccccaaccgcatc
ttcgcctcggacggcgcgtacagcgacaccgacctgagctacgtcgacttcgacagcttc
tcgacggacgacttcacgcccggccagtacaactga
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