Methanoculleus marisnigri: Memar_0300
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Entry
Memar_0300 CDS
T00477
Name
(GenBank) DNA-directed RNA polymerase, subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mem
Methanoculleus marisnigri
Pathway
mem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Memar_0300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mem03021
]
Memar_0300
Enzymes [BR:
mem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Memar_0300
Transcription machinery [BR:
mem03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Memar_0300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Thioredoxin_7
Motif
Other DBs
NCBI-ProteinID:
ABN56234
UniProt:
A3CS84
LinkDB
All DBs
Position
277473..280121
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AA seq
882 aa
AA seq
DB search
MTSPKRVGRIEFGLFSPKEIRKMSVRKIIWADTYDDDGFPYPQGLMDLNLGVIDPGLRCK
TCDQKAADCPGHFGHIELAKPVIHVGYTRLIRKLLRVTCRSCSRLLMTSEEVEKIIGPED
SELAGEIVSEKDIKKERVCPHCGEQQLKINFEKPTTFSEVFVEDGRKVEHKLTPADIRAR
LERIPDDDLRALGVNPDVARPEWTILTVLPVPPVTMRPSIILENGQRSEDDLTHKLVDII
RINQRFKENQDAGAPQLIIEDLWELLQYHVTTYLDNEVAGCPPARHRSGRPLKTLSQRLK
GKEGRFRGSLSGKRVNFSARTVISPDPNLSIGEVGIPLAIANEMTLPIRVTTFNIEEMRQ
YVLNGPERPTIRSPCGANYAIRPDNRRMRLSDANLETVAEMIEPGWTVERQLKDNDIVLF
NRQPSLHRMSIMAHRVVVMDGKTFRLNPAVCPPYNADFDGDEMNLHIPQTEEARAEAEIL
VSVSSNILSPRTGGPIIGGIHDHISGIFLLTHTVRHFSKEEVLYLTQHLPVEHLPEPDRM
DENGNPLWTNKQVFSLVLPDNLNMVFQASSCQNCETCKREMCENDAFVRVVNGNLITGTI
DKKGIGAFDGQILHRIIRQHGMKRAARFIDDVTKLSIRGIMLEGFSFGIDDEDLTRTEYG
QIDEVLDGAISDVDRRIKIYNEGQLEPMPGRTLEETLEMQIMQVLGKARDRTGEIAGRHL
GMDNSAVVMAVSGARGSMLNLTQMAGCLGQQSVRGERIMRGYEDRTLPHFRRNERGAEAH
GFITNSYKSGLSPTEFFFHAIGGREGLVDTAVRTSQSGYLQRRMINALQDLKVAYDGTVR
TTGGRIIQFRYGEDGTDPGRSSYGAPVDVKGIIESVLKEEVK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtccaaaacgtgttggaaggatcgagttcgggctcttctccccgaaggagatc
cgcaagatgagcgtccggaagatcatctgggcggacacctatgacgacgacgggtttccc
tacccgcagggcctgatggacctgaacctgggcgtcatcgaccccggtctccggtgcaag
acctgcgaccagaaagcggccgattgtccgggccacttcgggcacatcgaactcgcgaag
cccgtcatccacgtcggctacacccggctgatccggaaactcctgcgggtgacctgcagg
tcgtgctcccggctgctgatgacgtccgaagaggtcgagaagatcatcggacccgaggac
agcgaactcgcgggcgagatcgtctccgagaaagacatcaagaaagaacgggtctgcccc
cactgcggggagcagcagctcaagatcaacttcgagaaacccaccaccttctccgaggtc
ttcgtggaagacgggagaaaggtcgagcacaagctgaccccggccgatatccgggcacgc
ctcgagcggatcccggacgacgatctccgggctctcggggtcaacccggacgtcgcgcgc
cctgagtggacgatcctcactgttctcccggtcccgccggtcacgatgcggccctcgatc
attctcgagaacgggcagcggtccgaggatgacctgacccacaagctcgtggacatcatc
aggatcaaccagcggttcaaggagaaccaggacgccggtgcaccccagctgatcatcgag
gatctctgggaactcctgcagtatcacgtcaccacctacctcgacaacgaggtggcgggg
tgcccgcctgcccggcaccggagcggtcggcccttaaagaccctgtcgcagcgtctcaag
gggaaggaaggacggttccgcggctcgctttcgggcaagcgtgtgaacttctccgctcgt
acggtcatctctcccgatccgaacctctcgatcggcgaggtggggataccgctcgccatt
gcaaacgagatgacgcttccgataagggtgaccacgttcaacatcgaagagatgaggcag
tatgtcctgaacggccccgaacgccccaccatccggtcaccctgcggcgcaaactacgct
attcggccggacaacaggaggatgcgtctttcggacgcgaacctggagacggtcgcggag
atgatcgagccgggctggacggtggagcggcagttaaaggataacgatatcgttctcttc
aaccggcagccctcgctgcaccggatgagcatcatggcccaccgggtcgtcgtgatggac
ggaaagacgttccggctgaacccggctgtctgccccccctacaacgccgacttcgacggc
gacgagatgaacctgcatatcccgcagaccgaggaggcgcgggccgaggccgagatcctg
gtctcggtgtcgtcgaacatcctatcgccgaggaccggcggcccgatcatcgggggtatt
cacgaccacatctcgggtatctttctcctgacgcataccgtccgccacttcagcaaggag
gaggtgctctacctcacccagcacctgcccgtcgaacacctgcccgagccggaccgaatg
gacgagaacggcaaccccctctggacgaacaagcaggtcttctcgctcgttctccccgac
aacctgaacatggtcttccaggcctcgtcgtgccagaactgcgagacctgcaagcgggag
atgtgcgagaacgatgcgttcgtccgggtcgtcaacgggaacctgatcaccggtaccatc
gacaagaaggggatcggcgcgttcgacggtcagatcctgcaccggatcatcaggcagcac
ggcatgaagcgggcagcccggttcatcgacgacgtgaccaaactctcgatccggggcatc
atgctcgaagggttctcgttcggtattgacgacgaagacctgacccggacggagtacggc
cagatcgacgaggtgctcgatggcgccatcagcgatgtcgaccgccggatcaagatctac
aacgagggacagctcgaaccgatgcccgggcggacgcttgaagagacactcgagatgcag
atcatgcaggtgctcggcaaggcccgtgaccgcaccggtgagattgccgggcggcatctc
gggatggacaacagtgccgtggtgatggcggtctccggtgcgcgtgggtcgatgctgaac
ctgacgcagatggccgggtgtctcggacagcagtccgttcgtggcgagcgaatcatgcgt
ggctacgaggaccggacgctgccgcacttcaggcggaacgagcgcggcgccgaggcgcac
gggttcatcaccaacagttacaagagcggtctctctcccaccgagtttttcttccacgcc
atcggtgggcgtgagggtcttgtggacactgcggtcaggacgtcgcagagcgggtacctc
cagcggcggatgatcaacgccctgcaggacctcaaggtggcgtacgacggcaccgtccgg
acgacgggcggccggatcatccagttccgctacggcgaggacggaaccgaccccggaagg
agcagttacggcgccccggtggacgtgaagggtatcatcgagagcgtgctaaaggaggag
gtcaaatga
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