KEGG   Methanoculleus marisnigri: Memar_0411
Entry
Memar_0411        CDS       T00477                                 
Name
(GenBank) LSU ribosomal protein L24A
  KO
K15172  transcription elongation factor SPT5
Organism
mem  Methanoculleus marisnigri
Brite
KEGG Orthology (KO) [BR:mem00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Memar_0411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mem03021]
    Memar_0411
   03019 Messenger RNA biogenesis [BR:mem03019]
    Memar_0411
Transcription machinery [BR:mem03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     Memar_0411
  RNA polymerase I system
     Memar_0411
Messenger RNA biogenesis [BR:mem03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     Memar_0411
SSDB
Motif
Pfam: Spt5-NGN KOW KOW5_SPT5 KOW4_SPT5 SH3_KIN17_C NusG Glyco_hydro_65C
Other DBs
NCBI-ProteinID: ABN56344
UniProt: A3CSJ4
LinkDB
Position
395365..395838
AA seq 157 aa
MVESPNRIYAIKTTAKQERTVADNIEKVSREQKDIHVMAVMVPEELKGYVLVESPDSIAR
IEQLVELIPHARAVVQGSTALSEVEHFLVPKPVVSGITEGTIVEIIAGPFKGEKAVVKRI
DTGKEEITVELYESMVPIPITVRGDSVRVVERSEDAS
NT seq 474 nt   +upstreamnt  +downstreamnt
atggttgagagcccaaacaggatatacgcgataaagacgaccgcaaagcaggagcggacg
gtagccgataacatcgagaaggtgagccgcgagcagaaagacatccacgtgatggccgtc
atggttcccgaggaactgaaaggctacgtcctcgtggagagcccggactccatcgcccgc
atagagcagttggtggagctgatccctcatgcgcgcgcggtggtgcagggctcgacggct
ctctccgaggtggagcatttcctggtgccgaaaccggtggtcagcggcatcaccgagggc
accatcgtcgagatcatcgccggcccgttcaagggtgagaaagcggttgtcaagcgtatc
gataccggaaaggaagagattacggtcgaactctacgagagtatggttccgatcccgatc
acggtccgcggcgactctgttcgcgtcgtggagcgctcggaagacgcttcctga

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