Methanoculleus marisnigri: Memar_0473
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Entry
Memar_0473 CDS
T00477
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
mem
Methanoculleus marisnigri
Pathway
mem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Memar_0473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mem03021
]
Memar_0473
Transcription machinery [BR:
mem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Memar_0473
Prokaryotic type
Archaeal type
TFB
Memar_0473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
GFA
Lar_restr_allev
Zn_ribbon_LysW
Ribosomal_S27e
Trm112p
A2L_zn_ribbon
Cas12f1-like_TNB
HTH_AsnC-type
Zn_ribbon_SprT
FtrD-like
UPF0253
DUF5817
Zn_ribbon_IS1595
YnfU
DZR
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-ProteinID:
ABN56406
UniProt:
A3CSQ6
LinkDB
All DBs
Position
457936..458949
Genome browser
AA seq
337 aa
AA seq
DB search
MAEVEKLKQLQLQREALKKRGEQKVKETEKKRTEESVQSVCPECGSRQLVHDYERAELVC
QNCGLVLDEEFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSYGRA
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVYRDA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISRELGLK
LLPTSPIDYVPRFCSGLNLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILG
GERRTQREVAEVAGVTEVTIRNRYKELAEKLDIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtagaaaaactaaaacagctgcagttgcagcgcgaggccctgaagaagaga
ggggagcagaaggtcaaggagacggagaagaagcgcaccgaggagagcgttcagtccgtc
tgccctgagtgcggcagccgccagctcgtccacgactacgagcgcgcggaactcgtatgc
cagaactgtggtctcgtcctcgacgaggagttcatcgaccgcggccccgagtggcgtgca
ttcgaccacgaccagcgcatgaagcgctcccgtgtcggcgcaccgatgacgttcacgatc
cacgacaagggtctctcgacgatgatcgactggaggaaccgtgactcctacggccgcgcg
atctcgagcaagaaccgcgcccagctctaccgtctccggaagtggcagcggcgtatccgt
gtctcgaatgcgaccgagcggaacctggcgttcgcgctctcggaactggaccggatggcg
tctgcgctcggcctgccccggaacgtgcgcgagaccgcggcggtcgtctaccgcgacgcg
gtggacaagaacctgatccgcggccggagtatcgagggcgtcgcggcggcggcgctgtat
gcggcatgccggcagtgcagcgtcccgaggacgctcgatgagatcgccgaggtatcccgt
gtatcccgtaaggagatcggccgcacctaccggttcatctcccgcgagctcgggttaaag
ctcctgccgacgtccccgatcgattacgtaccgcgcttctgctcgggcctgaacctgaag
ggtgaggtccagagccgtgcggtcgagatccttcggcaggccggcgagcgcgaacttacg
agcggcagaggcccgacgggcgtcgcggcggccgccatttacatctcgtcgatcctcggc
ggagagcggcgcacccagcgcgaagtcgccgaggttgcgggcgtgaccgaggtcacgatc
aggaacagatataaggaactggcagaaaaattagatatcgagatcatactctga
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