Methanoculleus marisnigri: Memar_0538
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Entry
Memar_0538 CDS
T00477
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mem
Methanoculleus marisnigri
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mem03016
]
Memar_0538
Enzymes [BR:
mem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Memar_0538
Transfer RNA biogenesis [BR:
mem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Memar_0538
Prokaryotic type
Memar_0538
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Pus10_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ABN56471
UniProt:
A3CSX1
LinkDB
All DBs
Position
complement(520658..521566)
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AA seq
302 aa
AA seq
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MTGQERFVPESGIVVVDKPRGPSSHQVAAWVGGILGRRVGHAGTLDPQVSGVLIVMFGGA
VRLAPVLLSHNKEYVCLMRLHGDASRESVEQAAKEFTGRIYQRPPRKSAVKRSLRIRKIQ
EIEILDMDGRLVLFRVRCDAGTYIRTLCVHLGYALGTCAHMEELRRIRSGSFDETTIVTL
HELADAVAAAREGNHEPLQGMILPPAAAVADLAKVVVRDTAVDAVCHGAVLAGVGVVGKE
GGFAKGETVAIVTERGELVGLGKGLVNSSALKPGEPGFVVAPTTVLMRPGTYPRGWKART
GS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaccggccaggaacgtttcgtcccggaatccgggatcgtcgtcgtcgacaagccccgg
gggccgagcagccaccaggtggccgcctgggttgggggtatcctcgggcgccgggtgggc
cacgccgggacgctcgatccacaggtctccggggtgctcatcgtcatgttcggcggcgcc
gtccggctcgctcccgtcctcctctcgcacaacaaggagtatgtctgcctgatgcgcctt
cacggcgacgcctcccgggagtccgtggagcaggcggcgaaggagttcaccggccggatc
taccagcggccgccgagaaaaagcgcggtaaagcggagcctccggatcaggaagatccag
gagatcgagatcctggacatggacggccggctcgtcctcttccgggtcaggtgcgatgcc
gggacatacatccggacgctctgcgttcatctgggctacgcgctcgggacctgcgcacac
atggaggaactccggaggatacgatcgggatccttcgacgagaccaccatcgtcacgctc
cacgaactcgccgatgccgttgcagccgcccgggagggcaatcatgaacccctgcaggga
atgatcctccccccggcggccgccgtcgccgatcttgcgaaggtcgtcgtccgcgacacc
gccgtcgacgccgtctgccacggtgcggtgctcgccggggtgggggtcgtcgggaaagag
ggcgggtttgcaaaaggcgagacggtcgcgatcgtgaccgagcgcggcgaactcgtgggg
cttgggaagggcctcgtcaattcgtcggcgctgaaacccggggaaccggggttcgtcgtc
gcgcccaccaccgtcctgatgcggcccggcacctacccccgcggctggaaggcacgcaca
gggagctaa
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