Methanoculleus marisnigri: Memar_0641
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Entry
Memar_0641 CDS
T00477
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mem
Methanoculleus marisnigri
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mem03016
]
Memar_0641
Enzymes [BR:
mem01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Memar_0641
Transfer RNA biogenesis [BR:
mem03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Memar_0641
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
ABN56574
UniProt:
A3CT74
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All DBs
Position
613791..614801
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AA seq
336 aa
AA seq
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MLAIFDGTWVRLGGEGRALYEQGGYGRPEGRGLRLSPEEALYLMERNKIDVKDFGFDALL
GLFAGQPNFIRRYLVYRDIRERGYVIQPGPQDFRVFRRGHKPGAGKSRYLIRVLSERDIV
DFDRLSQDVVAAVNMRKQYLLAVVDDEDELTYYEVRVQDLPGVGEPAGCTTPVEATLFGT
YALAHLPPGTPLEEDWYGKRLDTERLLLRPVESIYLMRRGCLSITQDEEPMAAEQFLDAA
AEKDVEIREKERVFSDLREKGYIPRTGYKFGHHFRVYSGKKSHSEMLVHAVPSGTSTPMS
AVSRSVRLAHSVKKKMLFACIYNTDIRYVEFARIKL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgttggcgatattcgacggaacctgggtacgcctcggcggtgaagggcgggcgctctac
gagcagggcggctacggcaggcccgagggacgcggcctccgcctctctcccgaagaggcg
ctctacctcatggaacgaaacaagatcgacgtgaaagacttcggttttgacgccctgctc
ggcctctttgccggccagccgaacttcatccgcaggtacctcgtctaccgcgacatccgc
gagcgaggatacgtgatccagcccggcccgcaggatttccgcgtcttccgccgcggccac
aagcccggcgccgggaagtcccggtacctgatccgggtcctctccgagcgcgacatcgtc
gacttcgaccggttaagccaggacgtggtcgctgcggtcaacatgcgcaagcagtacctc
ctcgcggtcgtcgacgacgaggacgaactgacctactacgaggtgcgggtacaggacctt
cccggagtcggggagcctgcggggtgcacaacaccggtggaggccacgctcttcgggaca
tacgcgctcgcccacctgccgccgggaaccccgctcgaggaggactggtacggcaagaga
ctcgataccgaacggctgctcctccgcccggtcgagtcgatctacctcatgcgcagaggc
tgtctctcgatcacgcaggatgaggaaccgatggccgcagagcagttcctcgatgcggcg
gcagaaaaggacgtcgagatacgggagaaggagcgggtcttctcagacctccgggagaag
ggctacatcccgagaaccgggtacaagttcggccaccacttccgcgtctactccgggaag
aagagccattccgagatgctcgtccatgccgttccgtccgggacgtccacgccgatgagc
gccgtctcccgctcggtcaggcttgctcacagcgtcaaaaagaagatgttgtttgcctgc
atatataacaccgatatcagatacgtcgaattcgcccgaataaaactgtga
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