Methanoculleus marisnigri: Memar_0770
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Entry
Memar_0770 CDS
T00477
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mem
Methanoculleus marisnigri
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mem03032
]
Memar_0770
03400 DNA repair and recombination proteins [BR:
mem03400
]
Memar_0770
Enzymes [BR:
mem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Memar_0770
DNA replication proteins [BR:
mem03032
]
Prokaryotic type
DNA Topoisomerases
Memar_0770
DNA repair and recombination proteins [BR:
mem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Memar_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
HHH_5
Toprim
Zn_ribbon_Top1
RAD51D_N
HHH
Bystin
Motif
Other DBs
NCBI-ProteinID:
ABN56703
UniProt:
A3CTK3
LinkDB
All DBs
Position
complement(749064..751859)
Genome browser
AA seq
931 aa
AA seq
DB search
MHLIIAEKNISANRIAQILAGNEKVRATKDGSVSTYSFDTKTVVGLKGHVVEVDFEPGYT
NWRSETHTPRTLIDAGIVKKPTEKKIVNLIQKLSRKADLVTIATDYDTEGELIGKEAYEL
VRAVNPNVRINRARFSAITPAEIRTAFENLTDLDFDLAAAGEARQTVDLMWGASLTRFIS
LAARRGGTNILSVGRVQSPTLAMIVEREREIESFVPQTYWMLSLATEKDGVTIEARHTAG
RFTDHEAALAAEAGTKEPLVVTDVKEGQKNDRAPTPFDTTTFIVAASRLGLSAANAMRLA
EDLYMNGYISYPRTDNTVYPKSLNLNAILNTLKGGVFDKDVAWVQQNRRPVPTRGKKEST
DHPPIHPTGSATREALGQDRWKVYELVVRRFLATLSPDANWATTRCTFDASGEAYKATGG
RLLYAGWRRIYPYSEAKENILPVLAPGERLPIKNVNLEEKETQPPARYSQSRLIQVMEEL
GLGTKSTRHEVIGKLVSRRYVEGNPLRPTLVGRAVIDALDNHAETITEPEMTQTLEEHMQ
LIKQSQRSRDDVVTESREMLHRVFDKLEAHKSEIGTEIMEQTAEEHTVGPCPDCGHDLRI
RHIGVSQFIGCTGYPECRFNISLPGSTWGKAIRVEATCPEHNLSHVRLIRKGARPWDIGC
PLCSHITSNVEALRMMPSMTDDLMQRLHAQHIYTVSEIAGMQPEDLAKAVDVGTKEAVEL
AREAEDALEVLRRRSELRKFVRKIVPPRRGRSHAKIIKNLLGQGIGDIHALSVAEPAALK
KAGIPEAAGAELLEAARGLCNERALREAGVPAVSLKKYQAGGVATLDDFCYLPIPYLASK
TGINPETVHKHVDLVCRHLGRPAPQKISRTVFERGRKELLEVPGLGEATVDRLYLAGIYD
AATLRVADPEEVSSVTGIPKARLRDYIGHLK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
gtgcatctgatcatagcagaaaagaacatctcggcaaaccggatcgcgcagatcctcgcc
ggcaacgaaaaagtgagagcgacaaaggacggaagcgtatccacgtattccttcgacacg
aagacggtggtcggcctcaaagggcacgtggtggaggtagacttcgagcccggctacacg
aactggcggagcgagacccacacgccgcgaaccctcatcgacgcaggcatcgtcaagaag
ccgaccgagaagaagatcgtcaacctcatccagaaactctcgaggaaagcggatctcgtc
accatcgcgaccgattatgataccgagggagaactgatcggaaaggaggcctacgaactc
gtccgtgcggtgaaccccaacgtcaggatcaaccgtgcccggttctccgcgataaccccg
gcggagatccgcacagcgtttgagaacctgaccgacctcgacttcgacctcgcggctgcc
ggcgaggcccgccagacggtcgacctgatgtggggggcatcgctgacccggttcatcagc
ctcgcggcacgccggggcggcacgaacatcctctccgtcgggcgggtgcagagcccgacg
ctcgccatgatcgtcgagcgggagcgtgagatcgagagtttcgtcccccagacctactgg
atgctctcgcttgcaaccgagaaagacggcgtaacgatcgaggcgcggcataccgccggg
cggttcaccgaccacgaagcggccctcgccgcggaagcggggacaaaggagccgctcgtc
gtcacggacgtgaaagaagggcagaagaacgaccgggcgccgacgccgttcgacaccacg
accttcatcgtcgcggcgagccgcctgggcctctcggcggcgaacgcgatgcggcttgcc
gaagacctctacatgaacgggtacatctcctacccgaggaccgacaacacggtttacccg
aaatcgctgaacctgaacgcgatcctcaataccctcaaaggaggcgtcttcgacaaggac
gtcgcctgggtgcagcagaaccggcggcccgtcccgacccggggcaagaaggagagcacc
gaccacccgccgattcacccgacgggctccgcgacccgcgaggctctcgggcaggaccgg
tggaaggtctacgagctcgtcgtgcggcggttcctcgcgaccctctctcccgacgcgaac
tgggcgaccaccaggtgcaccttcgacgcgtccggcgaggcctacaaggccacgggcggc
aggctcctctacgccgggtggcgccggatctacccctactcggaagcgaaggagaacatc
ctcccggtgctcgccccgggtgaacggctgccgatcaagaacgtgaacctcgaggagaag
gagacgcagccgccggcgcgctactcccagagccggctcatccaggtgatggaggaactc
ggcctcggcacgaagagcacccggcacgaggtgatcggcaaactcgtctcccgccgctac
gtggaaggcaacccgctccgcccgacgcttgtcgggagagccgtcatcgacgccctcgac
aaccacgccgagacgatcacggagccggagatgacccagacgctcgaggagcacatgcag
ctcatcaaacagagccagcgctcccgcgacgacgtcgtcaccgagtcccgcgagatgctg
catagggtcttcgacaaactcgaggcgcacaagtcggagatcggcaccgagatcatggaa
cagaccgccgaggagcataccgtcggcccctgccccgactgcggccacgatctccggatc
cggcacatcggcgtctcccagttcatcggctgcaccggctaccccgagtgccggttcaac
atcagcctgcccggcagcacctggggcaaggcaatccgggtcgaagcgacctgtccggag
cacaacctctcccacgtccgcctgatccggaagggcgcccggccgtgggacatcggctgc
ccgctctgcagtcacatcacctcgaacgtcgaggcgctccggatgatgccctcgatgacc
gacgatctcatgcagcgcctgcacgcgcagcacatctacacggtctccgagattgcgggc
atgcagcctgaagacctcgcaaaggccgtcgacgtcggcacaaaagaggccgtagaactc
gcgagagaggcagaggatgcactcgaggttctccgccgccgttcggaactcaggaagttc
gtccggaagattgtgcccccgagaaggggccggagccacgcgaagatcatcaaaaatctc
ctcggacaggggatcggcgatatccacgcgctctcggtggccgaacccgccgcgctcaag
aaggccgggatcccggaggctgccggagccgaactcctggaagccgcccgcgggctctgc
aacgagcgcgccctccgggaggccggagttcccgcggtcagcctgaagaagtaccaggca
ggcggcgtcgcgactctcgacgatttctgttatctccccatcccctaccttgcaagcaaa
accggcattaacccggaaaccgtacataaacatgtggatctggtctgcaggcacctcggg
cgccctgccccccagaagatctccaggacagtctttgagcgcgggcgaaaagaactcctg
gaggtccccggactcggcgaagcgaccgtggacaggctctaccttgcaggcatctacgac
gccgcaacgctccgtgttgccgacccggaggaggtctcctccgtcaccggcatcccgaag
gccagactccgcgactacatcggccacctgaagtga
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