Methanoculleus marisnigri: Memar_0789
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Entry
Memar_0789 CDS
T00477
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mem
Methanoculleus marisnigri
Pathway
mem03022
Basal transcription factors
mem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Memar_0789
09124 Replication and repair
03420 Nucleotide excision repair
Memar_0789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mem03021
]
Memar_0789
03036 Chromosome and associated proteins [BR:
mem03036
]
Memar_0789
03400 DNA repair and recombination proteins [BR:
mem03400
]
Memar_0789
Enzymes [BR:
mem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Memar_0789
Transcription machinery [BR:
mem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Memar_0789
Chromosome and associated proteins [BR:
mem03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Memar_0789
DNA repair and recombination proteins [BR:
mem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Memar_0789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
DEAD
AAA_22
AAA_16
dnstrm_HI1420
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABN56722
UniProt:
A3CTM2
LinkDB
All DBs
Position
770824..772833
Genome browser
AA seq
669 aa
AA seq
DB search
MDSLDDWFPYREYRPHQREMLEAAASIARDGGIAMIDAPTGSGKSSVVSALLAESRGRKV
LVAVRTISQLATFMRELELIRKKRGNLKFAYLIGKSSMCPLGGEGDIYRRCEGVKSFSTA
LMRERAQKGSLVPANDRQIKQQIRKMDPEHPLICPYFIHGKSFVEPEDGGLKMIPSAALR
VRAERVSTELIWPDQLAGFCGDICPYDTMMHAARDADVVLVNFYHLFDDMIREQLYQSLG
IEGHDALLLIDEAHNCGDVVQSIESVTIEERDIVQAGHELSGRRRSPQADAIVQILPQIT
RFMEALKGSYETEDFFEPPVFQKMILSGTLYRSVEEIVDDLLKISEGIREKNMQAGEFRE
SAIERLTEFFYRIFRSAADPAYLTVYRKEEDGAVALEVRNIDPSTKLQDIARAHACCVLI
SGTLSPIESYRRYYFGDLPVTAMSLPNSFPPQNRRIFCANDITTAYSMRRDRENLARTED
YITTFARLPGNLAVYFPSYDLLNTFAERCAPRIRKKQIYIESKDATASAAMLREFMALPG
TGRSGILFAVCGGKWSEGLDYRGEMLSGALVIGLPLAPFNRVRRMVIDYFRMKFGEEGEF
ISYTLPAVNRALQALGRVLRTPDDRGMLILGDRRFLERRVHAGLPPWMQEEMTACTVEAF
RKEAERWRS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatagcctcgacgactggttcccgtaccgggagtaccggccccatcagcgggagatg
cttgaagcggccgcctccatcgcacgcgacggcggcatcgccatgatcgatgcgccgacc
gggagcggcaagtcgagcgtggtctccgcgctcctcgcggagagccggggacgaaaagtg
ctcgtcgccgtccggaccatcagccagctcgccacgttcatgcgcgagctcgagctcatc
cggaagaagcgcggcaacctcaagttcgcctacctcatcggcaagtcaagcatgtgcccg
ctcggcggcgagggcgatatctaccggcggtgcgagggcgtcaagtctttctcgacggcg
ctgatgcgggagcgggcgcagaagggctcgctcgtcccggcgaacgatcgccagataaag
cagcagatccgcaagatggacccggagcacccgctcatctgcccttatttcatccacggc
aaatcgttcgtggagcccgaggacggaggactgaagatgatcccgtcggcggccctgcgt
gtccgggccgagcgggtgagcaccgagctgatctggcctgaccagctcgccgggttctgt
ggcgatatctgcccttatgatacgatgatgcatgctgcccgggacgccgacgtggtgctc
gtgaacttctaccacctcttcgacgacatgatccgggaacagctctaccagtcgcttggg
atcgaggggcacgacgccctgctgctcatcgacgaagcgcacaactgcggagacgtcgtc
cagagcatcgagagcgtgacgatcgaggagcgcgacatcgtgcaggccggtcacgaactc
tccggacggcggcgatcgccgcaggcggacgccatagtccagatcctgccgcagatcacc
cggttcatggaggcgctcaagggctcttatgagacggaggacttcttcgagccgccggtc
tttcagaagatgatcctgtccggcacgctctaccggagcgtggaggagatcgtggacgac
ctcctcaagatcagcgaggggattcgcgagaagaatatgcaggcgggcgagttccgggag
agcgcaatcgagcggctgaccgagttcttctaccggatcttccgctccgccgccgacccg
gcatacctcacggtctaccgcaaagaagaggacggggctgtggcgctcgaggtccgaaac
atcgacccgagcaccaaactccaggacatcgcccgggcgcacgcctgttgcgttttgatc
tcggggacgctctcccccatcgagagttaccgccgctactacttcggcgaccttcccgtc
acggcgatgtcgctcccgaactccttccccccacagaaccgccgcatcttctgtgcaaac
gacatcaccaccgcctactcgatgcgccgggacagagagaacctcgcacggaccgaggac
tacatcaccacgtttgcccgcctccccgggaacctcgcggtctattttccctcctacgac
ctcctgaacacctttgcggagcggtgcgcaccccgcatcagaaagaagcagatctacatc
gagtccaaggatgccacagcctcggccgcgatgctccgggagttcatggccctcccggga
accggccgctcgggcatcctctttgcggtctgcggcggcaagtggagcgagggcctggac
taccgcggcgagatgctctcgggggcgctcgtcatcggcctcccgctcgcgccgttcaac
cgtgtcaggaggatggtgatcgactacttccggatgaagttcggggaggagggggagttc
atcagttacaccctcccggcggtcaaccgcgccctgcaggcgctcggccgggtgctccgg
acgcccgatgatcggggtatgctcatcctcggggacagaaggttcctggagcgccgggtt
catgcggggctgccgccgtggatgcaggaggagatgacggcatgcaccgtcgaagcgttc
cgaaaggaggccgagagatggcgatcctga
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