Methanoculleus marisnigri: Memar_1524
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Entry
Memar_1524 CDS
T00477
Name
(GenBank) Transcription factor IIE (TFIIE), alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mem
Methanoculleus marisnigri
Pathway
mem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Memar_1524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mem03021
]
Memar_1524
Transcription machinery [BR:
mem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Memar_1524
Prokaryotic type
Archaeal type
TFE
Memar_1524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
HTH_IclR
HypA
Sigma70_r4_2
APAF-1-like_WHD
GntR
Zn_ribbon_20
HTH_Crp_2
HTH_71
HTH_9
DUF7129
RepL
zf-LITAF-like
Motif
Other DBs
NCBI-ProteinID:
ABN57453
UniProt:
A3CVQ3
LinkDB
All DBs
Position
1526996..1527517
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AA seq
173 aa
AA seq
DB search
MVSVTELLDDPAINAYILRMIGEEGIELLRRFPEGGEHSDEELAEMTGVNLNTVRHTLYT
LYERRLAEYRRLKNTETGWLTYLWHLRLDRVHDVLEEQVRDALEHLDARLAYEEKNDFYM
CRNCSVVYTFTDAANWNFECPNCEEMLEHFDNELIAVALRKRIDRIKESLGSA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggtatccgtcactgaactgttggacgatccggcaatcaatgcctatatcctgcgcatg
atcggggaggagggaatcgaacttctcaggcggttccccgaaggaggagagcacagtgac
gaggaacttgccgagatgaccggggtcaacctcaacaccgtccgccacaccctttatacg
ctctacgagaggcgcctcgccgagtaccggcgactgaagaacaccgagaccggctggctc
acctacctctggcacctccgcctcgaccgtgtccacgacgtgctcgaagagcaggtccgg
gacgcgctcgagcacctcgacgcccggctcgcctacgaggagaagaacgacttctacatg
tgcaggaactgcagcgtcgtctacaccttcacggacgcggcgaactggaacttcgagtgt
ccgaactgcgaggagatgctcgaacatttcgacaacgaactcatcgccgtcgctctcagg
aagagaatcgacaggatcaaggagagcctcgggagtgcgtga
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integrated database retrieval system
