Methanoculleus marisnigri: Memar_1561
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Entry
Memar_1561 CDS
T00477
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mem
Methanoculleus marisnigri
Pathway
mem04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Memar_1561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mem03019
]
Memar_1561
03009 Ribosome biogenesis [BR:
mem03009
]
Memar_1561
04131 Membrane trafficking [BR:
mem04131
]
Memar_1561
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mem04147
]
Memar_1561
Messenger RNA biogenesis [BR:
mem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Memar_1561
Ribosome biogenesis [BR:
mem03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Memar_1561
Membrane trafficking [BR:
mem04131
]
SNARE
SNARE associated proteins
Others
Memar_1561
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Memar_1561
Exosome [BR:
mem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Memar_1561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
TIP49
AAA_14
AAA_22
AAA_5
AAA_33
RNA_helicase
AAA_28
nSTAND3
Mg_chelatase
NPHP3_N
ABC_tran
AAA_7
IstB_IS21
Parvo_NS1
ATPase_2
AAA_18
AAA_24
AAA_lid_PRS2_C
Sigma54_activat
DUF815
AAA_17
Zeta_toxin
AAA_3
PhoH
NB-ARC
AAA_19
SLFN-g3_helicase
bpMoxR
ATP-synt_ab
Macoilin
Motif
Other DBs
NCBI-ProteinID:
ABN57490
UniProt:
A3CVU0
LinkDB
All DBs
Position
1565610..1568036
Genome browser
AA seq
808 aa
AA seq
DB search
MANTESIEVTIKEAAHEDAGRGIARLSIDTMKALGLVSGDVVEVEGRHKAATLVWPGFPQ
DTGKAVLRIDGNTRSNVGSGIDDNVRIRKTEAGYAKKVTIQPTQPIRLMGGEQYLGRILR
GRPVTEGQLIRVNILGNPLTFAIARVAPKGIAIVTDSTEIELKETPYEPKEGRRETAAAD
VHYEDIGGLDRELQLVREMIELPLRHPELFERLGVEPPKGVLLYGPPGTGKTLIAKAVAS
EVDAHFITLSGPEIMSKYYGESEERLREVFEEAQENAPSIVFIDEIDSIAPKREEVKGEV
ERRIVAQLLALMDGLKTRGQVVVIAATNLPDMIDPALRRGGRFDREIEIGIPDTKGRQQI
FQIHTRGMPLAEDVRLDDYARSTHGFVGADIALLAKEAAMHALRRIIPHIKIEEEIPAEI
IDQLRVTNEDFIEAHKHVEPSAMREVLVEIPDVKWEDVGGLEDVKGELAEAVEWPLKYPE
IFASLETEPPRGILLFGPPGTGKTLLAKAVANESESNFISVKGPELLSKWVGESERGVRQ
VFRKARQAAPSIIFFDEIDALMPKRGSYIGSSHVTESVVSQILTELDGLEELNNVVVLGA
TNRPDMLDEALLRPGRFDRIIYVPPPDREGRKKIFEVYLKNREILANDVDIEELVDRTEG
YVGADIEALVREAKTSAMREFIAAMGGKTEEERRQAIGNVRITKNHFDDALSRVRGTLDI
DRLEENERHSWQILYNQEQRSALEDAVSTINRAGMRETGKIEQEVKDLTQALKDAVYQRK
KDFGEIKRLTKELKAKLERPLPQTGMAF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggccaataccgaatccattgaagtgaccatcaaggaggcggctcacgaagacgccgga
cggggaattgccagactgagcatcgacaccatgaaggcgcttggcctcgtcagcggcgac
gtcgtcgaggtcgaggggcgccataaggcagcgacgctcgtctggcccggtttcccccag
gacaccggcaaggcggtcctgcgcatcgacggcaacacccggagcaacgtcggatcaggg
atcgacgacaacgtccggatcagaaagaccgaagcgggatacgcgaagaaggtgaccatc
cagccgacccagcccatccgcctgatgggcggcgagcagtacctggggaggatcctccgc
ggcaggcccgtcaccgaggggcagctcatccgcgtcaacatcctcggcaacccgcttacg
ttcgcgatcgccagggttgcaccgaagggcatcgccatcgtcaccgacagcaccgagatc
gagctgaaagagactccgtacgagcccaaggaggggcgacgcgagacggcggcggccgac
gtccactacgaggacatcggcgggctcgaccgcgagctgcagctcgtccgggagatgatc
gaactcccgctccggcaccccgaactcttcgaacgcctgggcgtcgagcccccgaagggc
gtcctgctctacggcccgcccggcacgggaaagaccctgatcgcaaaagcggtggcgagc
gaggtggacgcgcacttcatcacgctctcggggcccgagatcatgagcaagtactacggc
gagtccgaagaacgcctgcgggaggtctttgaggaggcgcaggagaacgcgccctcgatc
gtcttcatcgacgagatcgactcgatcgcgcccaagcgcgaagaggtgaaaggcgaggtc
gagcgccggatcgtcgcccagttgctcgccctgatggacgggctgaagacccggggccag
gtcgtggttatcgccgcgacgaacctcccggacatgatcgaccctgctctgcggcgcggc
ggccggttcgaccgcgagatcgagatcggcatccccgacacgaaggggaggcagcagatc
ttccagatccacacacgcggcatgccgcttgccgaggacgtgagactcgacgattacgcc
cgttccacacacggtttcgtcggcgccgacatcgccctgctcgcaaaggaggcggcgatg
cacgcactccgccggatcatcccgcatatcaagatcgaagaagagatccccgccgagatc
atcgaccagctccgcgtcacgaacgaggacttcatcgaagcgcacaagcacgtcgagccg
agcgcgatgcgagaggtgctcgtagagatccctgatgtcaaatgggaggacgtcggcggg
ctcgaagacgtaaagggggaacttgcggaagccgttgagtggccgctcaaatatccggag
atattcgcgtcgctcgagaccgaacccccccgaggcatcctgctcttcggcccccccgga
acaggcaagacactccttgcaaaggcggtcgcaaacgagagcgaaagcaatttcatctca
gtaaaaggcccggaactcctctcgaaatgggtgggagaatcggaacgcggagttcggcag
gtattcaggaaagcgaggcaagcagcaccgtcgattatctttttcgacgagattgatgcg
cttatgcccaaacgtggatcttatataggatcatcgcacgtaactgaaagtgtggtaagc
cagatcctgacagagctcgacggcctcgaagaactcaacaatgtcgtggttctcggcgct
accaaccgcccggacatgttggacgaggcgctgcttcgccccggcagattcgaccggatc
atctacgtcccgccgcccgacagggaaggcaggaagaagatcttcgaggtgtacctgaaa
aacagggagatccttgcaaacgacgtggacatcgaggaactggtcgacagaaccgagggc
tacgtcggcgccgacatcgaggcgctggtccgcgaggcaaagacttccgccatgcgcgag
ttcatcgccgcaatgggagggaagaccgaagaggaacggcgtcaggcgatcggcaacgta
aggatcacgaagaaccacttcgacgacgccctctcccgcgtgagaggcacgctcgatatc
gaccggctggaggagaacgaacgccactcctggcagatcctctacaaccaggagcagcgg
tcggcactcgaagatgccgtctcgaccatcaaccgtgcaggaatgcgggagacgggaaag
atcgagcaggaagtcaaagatctcacgcaggccctcaaagatgcggtctaccagaggaag
aaagacttcggcgagatcaagcggctcacaaaggagttgaaggcaaaattagaacgtccg
ctgccccagacgggcatggcgttctga
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