Methanoculleus marisnigri: Memar_1816
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Entry
Memar_1816 CDS
T00477
Name
(GenBank) geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mem
Methanoculleus marisnigri
Pathway
mem00900
Terpenoid backbone biosynthesis
mem01100
Metabolic pathways
mem01110
Biosynthesis of secondary metabolites
Module
mem_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Memar_1816
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
Memar_1816
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mem01006
]
Memar_1816
Enzymes [BR:
mem01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Memar_1816
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Memar_1816
2.5.1.29 geranylgeranyl diphosphate synthase
Memar_1816
Prenyltransferases [BR:
mem01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Memar_1816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF7114
Motif
Other DBs
NCBI-ProteinID:
ABN57742
UniProt:
A3CWJ2
LinkDB
All DBs
Position
1803543..1804508
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AA seq
321 aa
AA seq
DB search
MTTLEDYLEMNAERIDKVLHRYFGDVHGDLFRASAHLLLAGGKRLRPAVVILAADAVRKG
SSDDLIPAALSLELTHNFTLIHDDIMDGDAARRGVPTVHTIWDEPTAILAGDVLYAKAFE
FICFSEAADAAKIRAVKMLARTCTDICEGQSMDMAFEKRHDVSEVEYLEMVSKKTGVLYG
ASAAIGGILAGASPVQADALYQYGVNSGIAFQIQDDLIDLLASSEASGKDRASDIREGKQ
TLIAIRAREKGIDLAPYRRELSGAEIDDLIARLREAGVIDQVRAVAVERAGIAKQALSIL
PDSEERRLLEEIADFFIARGN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcttgaagactacctggagatgaacgctgagcggatcgacaaggtgctccac
cgttacttcggagacgtccacggcgacctcttccgggcgagcgcccacctgctgcttgca
ggcggcaaacgcctccgcccggcggtcgtcatactcgccgcggatgcggtgaggaagggc
agctccgacgacctgatcccggcggctctttcgctcgaactgacccacaacttcaccctc
atccacgacgacatcatggacggcgacgccgcccggcgcggcgtgccgacggtgcacacg
atctgggacgagccgacggcgattcttgccggggacgtcctgtatgcgaaagcgttcgag
ttcatctgcttctcggaagccgcggatgccgccaagatccgggcggtgaagatgcttgcc
cggacatgcactgatatctgcgaggggcagagcatggacatggcgttcgagaagcgccac
gacgtctcggaggtggagtacctggagatggtcagcaagaagaccggcgtgctctacggg
gcatccgccgccatcggtggaatccttgccggggcgagtcccgtccaggccgacgccctc
tatcagtacggggtgaacagcggcatcgccttccagatacaggacgacctcatcgatctc
cttgcgagcagtgaagcgagcggcaaggaccgggcgtcggatatccgggaagggaagcag
accctgattgctatccgggcgcgggagaaggggatcgatctcgccccgtaccggagagaa
ctctccggcgccgagatcgacgacctgatcgcccggctccgggaggccggggtcatcgac
caggtcagggcggtcgccgtcgagcgggccggcatcgcgaaacaggcgctctcgatcctc
ccggactcggaggagaggcggcttcttgaggagatcgccgatttcttcattgctcgaggc
aactga
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