Methanoculleus bourgensis MAB1: MMAB1_0231
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Entry
MMAB1_0231 CDS
T04314
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mema
Methanoculleus bourgensis MAB1
Pathway
mema03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mema00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMAB1_0231 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mema03021
]
MMAB1_0231 (rpoB)
Enzymes [BR:
mema01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMAB1_0231 (rpoB)
Transcription machinery [BR:
mema03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MMAB1_0231 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
Vps36-NZF-N
Motif
Other DBs
NCBI-ProteinID:
CVK31448
UniProt:
A0A0X3BH44
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All DBs
Position
1:175207..176976
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AA seq
589 aa
AA seq
DB search
MDDPRDLVTRMREMRRNGGLSTEVNVSFKDFNNDVIIHTDRGRARRPLIVVRDGKPEVAG
EDIERLRNNEMTFEDLVRKGAIEFIDAEEEDDLFIAINEADLTPEHTHLEIDPSLILGIG
AAHVPFPEHNASPRVTMGAGMVKQALGFGAANMKLRPDTRGHMLHYVQKPLTYTQTSDVI
GSDERPAGQNFVVAILSYEGFNIEDALIINKASIDRGLGRSHFFRTYDGEERRYPGGQVD
RIEIPDEEVSGAHGAEYYANLDDDGIINPETVVHEKDVLIGKTSPPRFLEEPTSELIAVE
KRRDTSVTMRSNERGIVDTVIITEGENSSRLVKVRTRDLRVPEVGDKFASRHGQKGVIGL
IQPSEDMPFTESGMTPDLIINPHAIPSRMTIGHMLEMLGGKVGSLEGRRINATAFRGERE
ADLRRSLKELGFSHDGREVMYDGITGRRFAADIYVGVIYYQKLYHMVSSKMHARSRGPVQ
VLTRQPTEGRAREGGLRFGEMERDVMIGHGAAMALKERLLDESDKVTQWVCAKCGMVAML
DRKRKVTRCLACGSETDIYPVEMSYAFKLLLDEMKSMGIAPRLRLDDMV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtggatgacccccgggacctggtcacccggatgcgcgagatgcgccggaatggcggactc
tccaccgaggtcaacgtctccttcaaggatttcaacaacgacgtcatcatccacaccgac
cgcgggagagcgcgccggcccctgatcgtggtcagggacggcaaaccggaggtggccgga
gaggacatcgagcgtctccgcaacaacgagatgaccttcgaagacctggtacggaagggt
gcaatcgagttcatcgatgccgaagaggaagacgacctcttcatcgccatcaacgaagcg
gatctcacccccgagcacacccacctggagatcgatccttcgctcatcctgggtatcggt
gcggcgcacgttcctttccctgagcacaacgccagtccccgtgtcaccatgggcgcaggg
atggtcaagcaggcgctcgggttcggtgcggcaaacatgaaactccgccccgacacgcgg
gggcacatgctccactatgtccagaagccgctcacctacacccagacctccgatgtaatc
gggtccgacgagcgtccggcgggccagaactttgtcgttgcgatcctctcctacgagggg
ttcaacattgaagatgcgctgatcatcaacaaggcctccatcgaccggggtctcggacgg
tcgcacttcttccgcacctacgacggcgaggagcggcgctaccccggcggtcaggtcgac
cggatcgagatccctgacgaagaggtctccggcgcgcacggtgccgaatattacgcgaac
cttgatgacgacggcatcatcaaccccgagacggttgtccacgaaaaagacgtgctgata
gggaagacctctccgccgaggttccttgaggagcccacgagcgagctcatcgccgtcgag
aaacggcgcgacacctcggtcacgatgcggagcaacgagcgcgggatcgtggataccgtc
atcatcaccgagggcgagaactcctcgcgtctcgtgaaggtccggacccgtgacctccgg
gtgcctgaggtgggcgacaagttcgcgtcccggcacggccagaagggcgttatcggtctc
atccagccttcagaggatatgccgttcactgagtccggcatgacgcctgacctgatcatc
aacccccacgcgatcccgagtcgtatgaccatcgggcatatgctcgagatgctgggtggc
aaggtcggctccctcgagggccgccggatcaacgcgaccgcattccgcggcgagcgtgag
gcagacctccgaaggtcgctcaaggaactcgggttctcccatgacggccgtgaagtgatg
tacgacggcatcaccggccgccggtttgcggccgacatttatgtcggcgtcatctactac
cagaagctctatcacatggtctcgagcaagatgcacgcgcggtctcgcggcccagtgcag
gtgctcacccgccagccgactgaagggcgtgcccgcgagggtggtcttcggttcggtgag
atggagcgcgacgtgatgatcggtcacggtgcggctatggccctgaaagagcggctgctt
gacgaatctgacaaggtgacccagtgggtctgcgcaaagtgtggtatggtggcgatgctt
gaccggaagaggaaggtgacgcggtgtcttgcttgcggcagcgaaaccgatatctaccct
gtcgagatgagttacgccttcaagctcctcctcgacgagatgaagagcatgggcattgct
ccccgcctgagactcgacgatatggtgtaa
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