Methanoculleus bourgensis MAB1: MMAB1_2408
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Entry
MMAB1_2408 CDS
T04314
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
mema
Methanoculleus bourgensis MAB1
Pathway
mema03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mema00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMAB1_2408 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mema03400
]
MMAB1_2408 (uvrB)
DNA repair and recombination proteins [BR:
mema03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMAB1_2408 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMAB1_2408 (uvrB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
P-loop_SecA
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CVK33621
UniProt:
A0A0X3BNP6
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Position
1:1937876..1939804
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AA seq
642 aa
AA seq
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MTAFNLTADFAPRGSQPDAIRDLTEGIAAGERFQTLLGVTGSGKTFTIANVIDEVQRPTL
VIAHNKTLAAQLYNEFQSFFPENRVEYFVSYYDYYQPESYIPKRDLYIEKDAQINPKIEQ
MRLAATASVLSRPDTIVVASVSCIYGLGNPANFRGMGFEVKVRDRMLRDDIIRRLIDIQF
ERNDIELAPGRFRVKGDTIDIVPGYFNNVIRIELFGDEVDRISEIDRVSGQRLEAMDYFF
VYPARHFVVPEEEKERAIASIEKELDEWLPNLGMLEAHRLRQRTLYDIEMIRETGTCKGI
ENYSRHFDGRRAGEQPYCLLDYFPEDFMMVIDESHQTIPQVHGMYNGDYSRKKSLVDYGF
RLPSAFDNRPLKFDEFSRYMRNVIFVSATPGDYELKRSSVTEQIIRPTGLVDPAVEVRPI
EGQIPDVIEEIRATIDRGDRVLLTTLTKRLAEELSGYLADQGIKTRYLHSEINTIERTEI
IRQLRLGKYDVLVGINLLREGLDIPEVGFVGILDADKEGFLRDARSLVQIIGRAARNVNA
KVVLYADTMTDSIKKALAETERRRTMQLAYNARHGITPQTITKPIREKEVEITDVKHVPK
QEIPNLIIELEAEMREAAERLEFERAIALRDTIRKLEERAPQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacggcattcaaccttacagcggattttgcgccccggggatcgcagcccgacgctatc
cgggacctcacagaggggatcgccgccggcgagcggttccagaccctgcttggggtcacc
gggtcggggaagaccttcacgatagcgaatgtcattgacgaggtccagagacccacgctc
gtcatcgcccacaacaagacgcttgcggcccagctctacaacgagtttcaatcgttcttc
ccggagaaccgggtggagtacttcgtctcctactacgactactaccagcccgagtcctac
atcccgaagcgcgacctctacatcgagaaggacgcccagatcaacccgaagatcgagcag
atgcgccttgcggccaccgcatcggtcctttcacgccccgatacgatcgtcgtcgcctcg
gtctcctgcatctacggtctcgggaaccccgcgaacttccgggggatggggtttgaggtg
aaggtccgggaccggatgctgcgtgacgatatcatcaggcggctcatcgatatccagttc
gagaggaacgacattgagctcgcgccgggccggttcagggtgaagggcgacaccatcgat
atcgtccccggctacttcaacaacgtcatcaggatcgaactcttcggggacgaggtggac
cggatcagcgagatcgaccgggtctcagggcagcggcttgaagcgatggactacttcttc
gtctacccggcccgccactttgtcgtcccggaggaggagaaggagcgggcgatagcctcc
atcgagaaggaactcgatgagtggctcccgaacctcggcatgctcgaggcgcaccgcctg
cgccagcggaccctctacgacatcgagatgatccgggagaccgggacctgcaaggggatc
gagaactactcccgtcacttcgacgggaggagggccggggagcagccctactgcctgctg
gactacttccctgaggacttcatgatggtgatcgacgagagccaccagacgatcccgcag
gtccacgggatgtacaacggtgactactcgcggaagaagtcgctcgtggactacgggttc
cggttgccgtcggcgttcgacaaccggccgctgaagttcgacgagttctcgcgctacatg
agaaacgtcatcttcgtctcggcgacaccgggggactacgaactgaagcgctcaagcgtg
accgagcagatcatccggccgaccgggcttgtggacccggcggtcgaggtccggccgatc
gaggggcagattccagacgtaatcgaggagatccgggccacgatcgaccgcggggaccgg
gtgctcctgacgacgcttacaaagcggctcgccgaggaactctccggttacctggcagac
caggggatcaagactcgctacctccactccgagatcaacaccatcgagcggaccgagatc
atcaggcaactccgcctcgggaagtacgatgtgctcgtggggatcaacctcctgcgggag
gggctcgatatcccggaggtcgggttcgtcggtatccttgatgccgataaggaagggttc
ctccgtgacgcccggagcctggtccagatcatcgggcgggccgcccggaacgtgaacgca
aaggtcgtgctctacgccgacaccatgaccgactccatcaagaaggcgcttgccgagacc
gagcggcggcgcacgatgcaactcgcgtacaacgcaaggcacggcatcacgccgcagacg
atcacaaagccgatccgggaaaaagaggtcgagatcaccgacgttaagcacgttccaaag
caggagatcccgaacctgatcatcgaactcgaggccgagatgcgggaggcggcggaacgc
ctggagttcgagcgggcgatcgcgctccgcgacacgatcaggaagcttgaggagagggcg
ccgcagtaa
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