Methylocystis sp. MJC1: OGR47_01740
Help
Entry
OGR47_01740 CDS
T11178
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
memc Methylocystis sp. MJC1
Pathway
memc00521
Streptomycin biosynthesis
memc00523
Polyketide sugar unit biosynthesis
memc00525
Acarbose and validamycin biosynthesis
memc00541
Biosynthesis of various nucleotide sugars
memc01100
Metabolic pathways
memc01110
Biosynthesis of secondary metabolites
memc01250
Biosynthesis of nucleotide sugars
Module
memc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OGR47_01740 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OGR47_01740 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
OGR47_01740 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OGR47_01740 (rfbB)
00525 Acarbose and validamycin biosynthesis
OGR47_01740 (rfbB)
Enzymes [BR:
memc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
OGR47_01740 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UZX12204
LinkDB
All DBs
Position
349273..350325
Genome browser
AA seq
350 aa
AA seq
DB search
MRVLITGGAGFIGSAVARGFISQTSDEILVFDKLTYAGNLDSLALIAQNPRYSFRRADIC
DRAQVMRALTEFEPDVVMHLAAESHVDRSIDGPAAFIETNLVGTFTMLDAALEYWRGLPK
GKAEAFRFMHISTDEVFGTLGDEGFFREDTPYAPNSPYSASKAGSDHLVRAWRETYGLPT
IVTNCSNNYGPYHFPEKLIPLMILNALEGKPLPVYGRGENIRDWLFVEDHAAALMLVARR
GIVGQSYNVGGRNEKKNIDVVNTICDILDELRPKESGSYRNLITFVTDRPGHDLRYAIDC
SKIERELGWRPKETFETGLRRTVQWYLDNPAWWQAIRSGNYRGERLGQIA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgctcattaccggcggcgccggttttattggatcggcggtggcccgaggattt
atttcacaaacctccgatgaaatccttgtttttgacaaattgacctatgccggcaacctc
gattctcttgcgctgatcgctcagaatccgagatattctttccgacgcgctgatatttgt
gaccgtgcacaagttatgcgcgccctcaccgaattcgagcccgacgtcgtgatgcatctt
gccgccgagagccacgtcgatcgttcgatcgacggaccggccgctttcatcgagaccaat
ctcgtcggcaccttcacaatgctcgacgcggcgctcgaatattggcgcgggctgcctaaa
gggaaggccgaggctttccgcttcatgcatatttcgacggacgaggtcttcggcacattg
ggcgacgaaggctttttccgggaggatacgccctacgcgcccaattccccctattccgct
tcaaaagcgggctcggaccatctcgtgcgcgcctggcgcgagacctacggccttcccacc
atcgtcaccaactgttcgaataactacgggccttatcatttccccgaaaagctcatccct
ttgatgatcctgaacgcgctcgaggggaagccgcttcccgtctatgggcggggcgaaaat
atccgcgattggctctttgtggaggaccacgccgcagcgttgatgctcgtcgcgcgccga
ggcattgtcgggcagtcgtataatgtcggcggccgcaacgagaaaaagaacatcgatgtc
gtgaacacgatctgcgacattctcgacgagctgcgcccaaaggagagcggctcctatcgc
aatctcatcacatttgtcacagatcgtcccggccacgatctacgctatgcgatcgattgc
tccaaaatcgagcgcgaactcggctggcggccaaaggagacattcgagactggcttgcgc
aggactgtgcagtggtatctcgacaatccggcttggtggcaggccattcgttcgggcaat
tatcgcggcgagcgcctcggacaaattgcctga
DBGET
integrated database retrieval system