Methylocystis sp. MJC1: OGR47_03920
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Entry
OGR47_03920 CDS
T11178
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
memc Methylocystis sp. MJC1
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
memc03021
]
OGR47_03920 (rpoH)
Transcription machinery [BR:
memc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OGR47_03920 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_3
HTH_11
HTH_19
Sigma70_r3
Sigma70_r4_2
KORA
GntR
LysM
DprA_WH
HTH_15
Motif
Other DBs
NCBI-ProteinID:
UZX12617
LinkDB
All DBs
Position
799411..800295
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AA seq
294 aa
AA seq
DB search
MANALPIVAEGGLARYLAEIRRFPMLEPQQEYMLAKRWREHEDPKAAQKLVTSHLRLVAK
IAMGYRGYGLPIGEIVSEGNVGLMQAVKRFEPDRGFRLATYAMWWIRASIQEYILRSWSL
VKMGTTASQKKLFFNLRKAKSRISAFEEGDLRPENVEKIATRLGVSQQDVIEMNRRMGGD
ASLNAPLREEGEGEWQDWLVDDSDDQERVLAAQEESSNRLKALRGALDVLNPRERRIFEA
RRLADDPVTLEQLSEEFGVSRERVRQIEVRAFEKVQAAVKSGVARIEETHAAAM
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgctttgcccatcgtcgcggaaggcgggctcgcccgctaccttgccgaaatc
cgccggttccccatgctggagccgcagcaggaatatatgctcgccaagcgttggcgcgaa
catgaagacccgaaggctgctcagaagcttgtcacctcgcatctgcgcctcgtggccaag
atcgccatgggctatcgcggctacggcctgccgatcggcgagatcgtctccgaaggcaat
gtcggcctgatgcaggccgtcaagcgcttcgagccggatcgcggcttccgcctcgccaca
tatgcgatgtggtggatccgcgcgtccattcaagaatatatcctgcgctcatggtcgctc
gtcaaaatgggcaccaccgccagccagaagaagctcttcttcaacctccgcaaggccaag
agccgcatctccgccttcgaggagggcgatctgcggcccgagaatgtcgagaagattgcg
acgcgcctcggggtctcgcagcaggacgtgatcgagatgaaccgccgtatgggcggcgac
gcctcgctcaacgcgccgctgcgggaggaaggggaaggcgaatggcaggattggctcgtc
gacgacagcgacgaccaggagcgcgtcctcgccgcgcaggaggagagcagcaatcgcttg
aaggcgctgcgcggcgcgctcgacgtgctcaatccgcgcgaacgccgcatcttcgaggcg
cgccgcctcgccgacgatccggtgacgctcgagcaactttccgaggagttcggcgtctcc
cgcgagcgcgtgcggcagatcgaagtccgcgccttcgagaaggtgcaggcggcggtgaag
tccggcgtggcgcggatcgaagaaacccacgcagcggcgatgtga
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