Methylocystis sp. MJC1: OGR47_05905
Help
Entry
OGR47_05905 CDS
T11178
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
memc Methylocystis sp. MJC1
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
memc03009
]
OGR47_05905 (rimO)
Enzymes [BR:
memc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OGR47_05905 (rimO)
Ribosome biogenesis [BR:
memc03009
]
Prokaryotic type
ribosomal protein modification factors
OGR47_05905 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UZX12978
LinkDB
All DBs
Position
complement(1225592..1226938)
Genome browser
AA seq
448 aa
AA seq
DB search
MQENQKPAAAPRVSFVSLGCPKALVDSERIVTRLRAEGYELARHHAGADVVVVNTCGFLD
SAKAESLEAIGAALAENGKVIVTGCMGAEPEAITERFPGVLAVTGPQQYESVVEAVHRAA
APAHDPFVDLVPEQGVKLTPRHYAYLKISEGCDNSCSFCIIPHLRGPLVSRPAADVLREA
EKLARAGVKELLVISQDTSAYGRDLRYAESMFGDRAVRARFLDLAKELGELGIWVRLHYV
YPYPHVDEAIGLMAEGKVLPYLDIPFQHAAPNVLKAMKRPANEEKTLARIKSWRAACPDL
TLRSTFIVGFPGETEEDFETLLQWLDEAEIDRAGAFKYEPVAGAPANDLGLTPVPDEVKE
NRWKRFMEKQQAVSARLMKRKVGKRLQVIIDEAGGGPAGVLAKGRTKADAPEIDGTAFVA
ARRPLRPGDIVTMKVERADAYDVYGAAG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaaccagaaaccggccgccgccccgcgcgtttccttcgtctcgctgggctgc
cccaaggcgctcgtcgacagcgagcgcatcgtcaccagattgcgcgccgagggctatgag
ctcgcgcgccatcacgccggcgccgatgtcgtcgtcgtcaacacctgcggctttctcgat
agcgccaaggccgagtcgctcgaggcgatcggtgcggcgctcgccgagaacggcaaggtc
atcgtcacgggctgcatgggcgccgagcccgaggccatcaccgagcgctttcccggcgtt
ctcgccgtcaccggcccgcagcaatatgagagcgtcgtcgaggccgtgcaccgcgccgcc
gcgcccgcgcatgatcccttcgtcgatctcgtgcccgagcaaggcgtgaagctcacgccg
cgccattacgcctatctgaaaatctccgagggctgcgacaacagctgctccttctgcatc
attccgcatctgcgtgggccgctcgtctcgcgcccggccgccgatgtgctgcgcgaggcc
gagaagctcgcgcgcgccggcgtgaaggaattgctggtgatctcgcaggacacgagcgcc
tatgggcgcgacctgcgctatgcggaaagcatgttcggcgaccgcgccgtgcgcgcgcgt
ttcctcgatcttgccaaggagctcggcgagctcgggatctgggtgcggctgcattacgtc
tacccctacccccatgtcgacgaggcgatcggcctgatggcggagggaaaagtccttccc
tatctcgacattcccttccagcacgccgcgcccaatgttctgaaggccatgaagcgcccc
gccaatgaagagaagacgctcgcgcgcataaaaagctggcgcgccgcctgcccggacctc
acgctacgctcgaccttcatcgtcggcttccccggcgagaccgaggaggatttcgaaacg
ctgctgcagtggctggacgaggccgagatcgaccgcgccggcgccttcaaatatgagccc
gtcgccggcgccccggcgaatgacctcggccttacgcccgtgccggacgaggtgaaggaa
aaccgctggaagcgcttcatggagaagcagcaggcggtctccgcccggctgatgaagcgc
aaggttggcaagcgccttcaggtcatcatcgacgaggcgggcggcggccccgcgggcgtg
ctcgccaagggccgcaccaaggccgacgcgccggagatcgacggaaccgccttcgtcgcc
gcccgccgccccctgcggccgggcgacattgtgacgatgaaggtcgagcgcgccgacgct
tacgatgtctacggcgcagccggctga
DBGET
integrated database retrieval system
