Methylocystis sp. MJC1: OGR47_06070
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Entry
OGR47_06070 CDS
T11178
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
memc Methylocystis sp. MJC1
Pathway
memc03030
DNA replication
memc03430
Mismatch repair
memc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OGR47_06070 (holA)
03430 Mismatch repair
OGR47_06070 (holA)
03440 Homologous recombination
OGR47_06070 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
memc03032
]
OGR47_06070 (holA)
03400 DNA repair and recombination proteins [BR:
memc03400
]
OGR47_06070 (holA)
Enzymes [BR:
memc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OGR47_06070 (holA)
DNA replication proteins [BR:
memc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OGR47_06070 (holA)
DNA repair and recombination proteins [BR:
memc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OGR47_06070 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
UZX13011
LinkDB
All DBs
Position
1260300..1261322
Genome browser
AA seq
340 aa
AA seq
DB search
MVAVSSREAERFIASPPENIFLFLVHGADAGMVRERALAIIGKRVDDRHDPFQFVELSGD
AVSADPLTLLDEANTTPLFGGRRAILVETGAKSVIPAVTSLISAPPAACAVVLTASALKK
DAPLRKLVEGAKQGAGIECLPDTEQDIHALVDRTLREANLVATPEARALLLAALGEDRLM
SRAELAKLVLYMHGREHVEAADVEAIVAHASSIASDRVVAAAFAGDAGETLDAYFAQGGD
AGAILFGALRYAVALHRARLAMERESGRTDAGVTALFRAGFGFMHRALMEEQLKAWTSAR
LAALIEPLREAQTRVRANAASAQMEAERALWRVAKAARRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgccgtctcgagccgcgaggctgagcgcttcattgcgtctccgcccgagaatatc
tttctctttctcgtccatggcgccgacgcgggcatggtgcgcgagcgggcgctcgccatc
atcggtaagcgcgtcgatgatcgccacgatcccttccaattcgtcgagctttcgggcgac
gcggtatccgccgatccgctgaccctcctcgatgaagccaacaccacgccgctctttggc
gggcggcgcgccattctcgtggagacaggcgcgaaatccgtcatacctgccgttacctcg
ctcatctcggccccgcctgccgcctgcgcagtggtcctcaccgccagcgcgctgaagaag
gatgcgccgctacgcaagctggtcgagggggcgaagcagggggcggggatcgaatgcctg
cccgacaccgagcaggatattcacgcgctcgtcgatcgcacgctgcgtgaggccaatctc
gttgcgacgccggaagcgcgcgcgcttcttctcgcggcgctgggcgaggaccggctgatg
agtcgcgccgagctcgccaagctcgttctctatatgcatgggcgcgagcatgtcgaagcg
gcggatgtcgaagcgatcgtggcgcatgcctcgagcattgcttccgatcgggtcgtggcg
gcggccttcgccggcgacgcgggcgagacgctcgatgcttatttcgcgcaagggggcgat
gcgggcgcgatcctcttcggcgcgctgcgttacgccgtggcgctgcatcgcgcgcggctc
gccatggagcgcgagagcggacgcacggacgcgggggtcacggcgctgtttcgcgccggc
ttcggcttcatgcatcgcgcgctgatggaggagcagctcaaggcctggacctcggcgcgt
ctcgccgcgctgatcgagccgctgcgcgaggcccaaacccgcgtccgcgccaatgcggca
agcgcgcaaatggaggccgagcgggcattgtggcgggtggcgaaggcggcgcggagaagg
tga
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