Methylocystis sp. MJC1: OGR47_11240
Help
Entry
OGR47_11240 CDS
T11178
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
memc Methylocystis sp. MJC1
Pathway
memc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OGR47_11240 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
memc03019
]
OGR47_11240 (pnp)
03016 Transfer RNA biogenesis [BR:
memc03016
]
OGR47_11240 (pnp)
Enzymes [BR:
memc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OGR47_11240 (pnp)
Messenger RNA biogenesis [BR:
memc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OGR47_11240 (pnp)
Transfer RNA biogenesis [BR:
memc03016
]
Prokaryotic type
tRNA degradation factors
OGR47_11240 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
aRib
Motif
Other DBs
NCBI-ProteinID:
UZX10498
LinkDB
All DBs
Position
2298546..2300699
Genome browser
AA seq
717 aa
AA seq
DB search
MFQVHREELDWAGRKLVLETGKIARQADGAVLASWGETTVLATIVAAKAPKPGQDFFPLT
VNYQEKAFAAGRIPGGYFKREGRPSERETLISRLIDRPIRPLFPDAFRCDTQVIVTVLSH
DLENDPDILAMVAASAALTLSGVPFMGPVGGARVGYINGQLKLNPTIEEMKLSDLDLVVA
GTQDAVLMVESEAKELSEELMLEAVMTGHRGFQPVIDAIIRLAERAAKDPRDLVVPDRSE
VAAFVSRIAEAELREAYKLTVKQHRYAAVDSVKAKVMAELFPEGEATNFTKEEVAEVFKE
LQAKVVRWNILDTGIRIDGRDVKTVRPIVAEVGVLPRAHGSALFTRGETQALVVSTLGTA
EDEQFVDSLEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAA
EFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPIKAPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTSNGVTSLQMDIKIAGITEEIMRVALGQAKEGRMHILGEMAK
AITSSRAELGEFAPRIETLKIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKVAS
SDGNSIKAAINWIKSIASDPEVGMIYEGTVVKTADFGAFVNFFGAKDGLVHISQLSKQRV
AKTTDVVKEGDRVKVKLLGFDDRGKVRLSMRVVDQETGEDLEAKEKAEKEAAGANGE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagtccaccgcgaagaactcgactgggccggccgcaagctcgtcctcgagacc
ggcaagatcgcccgccaggccgacggcgccgttctggcgagctggggcgagaccactgtg
ctcgcgaccatcgtcgccgccaaggccccgaagccgggccaggacttcttcccgctgacc
gtcaattaccaggagaaggccttcgccgccggccgcattccgggcggctatttcaagcgc
gagggtcgtccctcggagcgtgagacgctgatctcccgcctcatcgaccgcccgatccgt
ccgctcttcccggacgctttccgctgcgacacccaggtcatcgtgaccgtgctgtcgcat
gacctcgaaaacgatcccgacatcctcgccatggtcgcggcctccgccgcgctgacgctc
tcgggcgtgcccttcatggggcccgtcggcggcgcgcgcgtcggctatatcaacggccag
ctcaagctcaatccgacgatcgaggagatgaagctctccgatctcgatctcgtcgtcgct
ggcacgcaggacgccgtgctgatggtcgaatcggaagccaaggagctttccgaagagctg
atgctcgaggccgtgatgaccggccaccgcggcttccagccggtgatcgacgcgattatc
cggctcgccgagcgcgctgcgaaggacccgcgcgacttggtcgtccccgaccgttcggaa
gtcgccgctttcgtctcacggatcgccgaggccgagctgcgcgaggcctacaagctcacc
gtgaagcagcaccgctacgccgcggtcgactcggtgaaggcgaaggtcatggcggagctc
ttccccgagggcgaggcgacgaacttcaccaaggaagaagtcgccgaggtcttcaaggag
ctgcaggccaaggtcgtccgctggaatatcctcgacaccggcatccgcatcgacggccgc
gacgtgaagaccgtgcgcccgatcgtcgccgaggtcggcgttctgccgcgcgcccatggc
tcggcgctcttcacccgcggcgagacgcaggcgctggtcgtctccacgctcggcacggcg
gaagacgagcaattcgtcgattcgctcgagggcacctataaggagcgcttcctgctccat
tacaacttccccccctattccgtcggcgaaacgggccgcatgggttcgcccggccgccgc
gaaatcggccatggcaagctcgcctggcgcgcgatccatccgatgctgccggccgcggcc
gaattcccctatacgcttcgcgtcgtctcggagatcaccgagtccaacggctcgtcgtcg
atggcgacggtctgcggcacctcgctcgcgctgatggacgccggcgtgccgatcaaggcg
ccgacggccggcatcgccatgggcctgattctggaaggcgagcgcttcgccgtgctctcc
gacattctcggcgacgaggatcacctcggcgatatggacttcaaagtggcgggcacgtcc
aatggcgtgacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
cgcgtcgccctcggccaggccaaggaaggccgcatgcacatcctcggcgagatggcgaaa
gccatcacctcctcccgcgccgagctcggcgaattcgcgccgcgcatcgagacgttgaag
attccgaccgacaagatccgcgacgtgatcggctcgggcggcaaggtcatccgcgagatc
gtcgagaagaccggcgccaagatcaacatcgaggacgacggcaccgtgaaggtcgcatcc
agcgacggcaattcgatcaaggccgccatcaactggatcaagtccatcgcttctgacccc
gaagtcggcatgatctatgaaggcacggtcgtgaagaccgccgatttcggcgctttcgtg
aacttcttcggcgccaaggacggcctcgtccatatctcgcagctctccaagcagcgcgtg
gcgaagacgaccgacgtcgtgaaggaaggcgaccgcgtgaaggtgaagctcctgggcttc
gacgatcgcggcaaggtgcgcctctccatgcgcgtcgtcgatcaggagacgggcgaagac
ctcgaggccaaggaaaaggccgagaaggaagccgccggcgccaatggcgagtga
DBGET
integrated database retrieval system
