Methylocystis sp. MJC1: OGR47_11280
Help
Entry
OGR47_11280 CDS
T11178
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
memc Methylocystis sp. MJC1
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
memc03400
]
OGR47_11280 (addB)
Enzymes [BR:
memc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OGR47_11280 (addB)
DNA repair and recombination proteins [BR:
memc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OGR47_11280 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UZX10505
LinkDB
All DBs
Position
complement(2308740..2311856)
Genome browser
AA seq
1038 aa
AA seq
DB search
MGVRRNVFTIAPGAPFLETFVEAFLAGEIVSALSRETPPLAMARTTIYVPTQRAARALRT
QFARAFDKGATLLPRILPLGGLEERETTALFGDFSDDFDAAALPQIEELERRLLLAQLIV
KWSEAVGAAIVSADGQGDFVYDDSEPFLVASSPAGAYALAADLSALVDEFIIEDIPADAI
DRAIDDSAFDPYWSITTTFLRIALQQWPQMLEEIDRVDASARQKRLIETQIAKLSESQDH
APVIAIGSTGAQPTTARLLSAIAARDNGAVVLPGLDLDMSDAAWAQVGEGEGEPAFTHPQ
TMLKRLLGVMQLTRGDVRELSTSDMRAERRRLVSQAMLPADATAVWRDFRSAHSARFDAA
LDGVALLEAPDEQAEALSLALFLREALETPGQTAALVTPDRTIARRVAAELRRFEIEIDD
SGGASLASTQAGALARELAGVGAKGLDAIAIASLLTHPLTRLGRTREDIVMLAPLVEIGA
LRGLPASAAGYAARAGEARRAADDWRAHPAARRIEEARWAQIESLLRDMEAALAPLLALR
DAQDLRAFAHAHRAAFEAIAQGAQETEGEESEDEGALALFDLFDRLARADAPSGFTASAY
AALFDRIAFETTLRGPRRAHPRLKILGSLEARLIEADLMLLAGLDESIWPPQTETGAFLN
RSMRAQLGLSPPERRIGQSAHDFMMGLGAKRVVLSRAAKRDGSPTVASRFLTRLEALAGE
VIEACRARGAKMLAIAIALDQPGVDEATTLSRPAPRPPIDLRPESLSVTRIEVLRRDPYA
IFAEHILKLKPLDPLGVEMGPREIGTAIHAALETFVKSYPSGPLPTSAREELQEIARALL
KEFLTDPAFETFVWPRLMAGLDHALDFEAQRRVEGGVIFMEKAASWALPLIDGSTFTLTA
KADRIEIGPDKRACVFDYKTGKPPSMKQVQAGFAPQLTLEAAMVEAGAFKEIGAHVVAGA
AYVGLKDGGKTQFLKFDGASFEEVVAKHAEELVKMLSQYRNPETPYPSRPFVALVAHEGD
YDHLARVKEWSRGGGEGA
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgtcaggcgcaacgtcttcaccattgcgccgggcgcgccatttctcgaaaccttc
gtcgaggcctttctcgctggcgaaatcgtttccgcgctttcgcgcgaaacaccgccgctc
gccatggcgcgaacgacgatttatgtgccgacgcagcgcgctgcgcgcgcgctgcgcacg
caattcgcccgcgccttcgacaagggcgcaacgctcttgccgcgcattctgccgctcggc
ggattggaggagcgcgagaccaccgcgctcttcggcgatttctcggacgatttcgacgcc
gccgcgctgccgcagatcgaggagctggagcgacgtcttctgctcgcgcagctcatcgtg
aaatggtccgaggccgtcggcgccgcgatcgtttcagcggacgggcagggcgacttcgtc
tacgacgacagcgagcctttcctcgtcgcctcttcgcccgccggcgcctatgcgcttgca
gccgacctcagcgcgctcgtcgacgaattcatcatcgaggacatccccgccgacgccata
gatcgagcaatcgacgacagcgccttcgatccctattggtcgatcaccacgactttcctg
cgcatcgccttgcagcaatggccgcagatgctggaggagatcgaccgcgtcgacgcctcg
gcgcgccagaagcgcctgatcgaaacgcagatcgcgaagctctcggaaagccaggatcac
gcgccggtgatcgccatcggttcgaccggcgctcagccgacgacggcgcgactgctctcc
gccatcgccgcgcgcgacaatggcgcggtggttttgccggggctcgatctcgacatgagc
gacgccgcctgggcgcaagtgggggagggcgaaggcgagcccgctttcacccatccgcag
accatgttgaagcgcctgctcggcgtgatgcaattgacgcgcggcgacgtgcgcgagcta
tcgacatccgatatgcgcgccgagcgccgccgactcgtctcgcaggcgatgttgccggcg
gatgcgacggccgtgtggcgcgattttcgaagcgctcacagcgcgcgtttcgacgccgcg
ctcgatggcgtcgccttgctggaggcgcccgacgagcaggccgaggcgctctcgcttgct
ttgttcctgcgcgaggcgctggagacgcccggtcaaacggccgccctcgtcacgcctgac
cgcacgatcgcgcggcgcgtcgccgccgagttgcggcgcttcgagatcgagatcgacgat
tccggcggcgcgtcgctcgcctcgacgcaagccggcgcgctggcgcgggagcttgccggg
gtcggcgcgaaggggctcgatgcgatcgccattgcgtcgctgctcacacatccgctgacg
cgcctgggtcgtacgcgggaggacatcgtgatgcttgcgcctctcgtcgagatcggcgcg
ctgcgcgggttgccggcgagcgcggctggctatgccgcgcgggcgggggaagcgcggcgg
gcggcggacgattggcgcgcgcatccagcggcgcggcgcatcgaagaggcccgatgggcg
cagatcgaatcccttttgcgagacatggaagcggccctggcgccgcttctcgccttgcgc
gacgcacaggatctgcgggctttcgcgcatgcgcatcgcgcggccttcgaggcgattgcg
caaggggcccaagagactgagggcgaagagagcgaggacgaaggcgccttggcgttgttc
gatctcttcgatcggctcgcgcgcgccgatgcgccatcgggcttcaccgcctcggcctat
gcggcgctcttcgatcggattgccttcgaaacgactctgcgagggccgcgccgcgcccat
ccgcgcttgaaaattctcgggtccctcgaagcgcgcctcatcgaggccgacctcatgctg
ctcgcgggactggacgaaagcatttggccgccgcagacggaaacgggtgcctttctgaac
cgttcgatgcgcgcgcaactggggctctcgccacccgaacgacgaatcggacagagcgcg
catgacttcatgatggggctcggcgcgaaacgcgtcgtgctcagccgcgccgccaagcgc
gacggttcaccgacggtcgcgtcccgctttctcacgcgcctcgaagcgctcgcgggggaa
gtgatcgaggcctgtcgcgcgcgcggcgcaaaaatgctcgcgatcgcaatcgcgctcgat
cagccaggcgtcgatgaagccacgacgctgtcgcggccggcgccgcgaccgccaatcgac
ctgcgtccagagagcctcagcgtcacgcgcatcgaagtcttgcggcgcgatccttacgcc
atcttcgccgagcacattctaaagttgaagccgctcgatcctctgggcgtggaaatgggc
ccgcgcgagatcggcacggcgattcatgccgcgctcgaaaccttcgtaaagagttatccg
agcggtcctctgccgacgtcagcgcgcgaggagcttcaggagatcgcgcgcgcgcttttg
aaggaattccttaccgatcccgcgttcgagaccttcgtctggccgaggctcatggcgggg
ctcgatcacgcgctggatttcgaagcgcaaaggcgcgttgagggcggcgtgatcttcatg
gagaaggccgcgtcctgggcgctcccgctgatcgacggctccaccttcacgcttaccgca
aaggcggatcgcatcgagatcgggcccgacaagagagcctgcgtcttcgactacaagacc
ggcaagccgccgagcatgaagcaggtgcaggcgggtttcgcgccgcagctcaccctcgaa
gcggcgatggtcgaagcgggcgccttcaaggagattggcgcgcatgtcgtcgccggcgcc
gcttatgtggggctgaaggacggcggcaaaacacagtttttgaaattcgacggcgcctcc
ttcgaggaggtggttgcgaagcacgcggaagaactcgtgaagatgctctcgcaatatcgc
aatccggagacgccctatccgtcgcgtccctttgtggcgctcgttgcgcatgaaggcgat
tacgatcatctcgcgcgcgtgaaggaatggtcgcgcggcggcggagagggcgcatga
DBGET
integrated database retrieval system
