Methylocystis sp. MJC1: OGR47_13245
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Entry
OGR47_13245 CDS
T11178
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
memc Methylocystis sp. MJC1
Pathway
memc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OGR47_13245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
memc03400
]
OGR47_13245
Enzymes [BR:
memc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OGR47_13245
DNA repair and recombination proteins [BR:
memc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OGR47_13245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
WHD_PriA_bact
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UZX10857
LinkDB
All DBs
Position
2725437..2727680
Genome browser
AA seq
747 aa
AA seq
DB search
MSAAQDHSKRAHTVDVLAPVAVDTTYSYLAPPALGLQPGDSVQVPLGAREAYGVVWSVDD
AERPRGNLKTVITRLDRPPLSQKLRDFIDWLARYTLTPRGMALRLATRAAEEAAPDTLRT
LYRAGGKKPERLTPTRARVLEAAQGGMAFSKKALAEAAACSTGVIDGLVDEGALETIAAP
PEPVARALDPDFAAPLLEPAQREAADALTDAVRARAFKPFLLEGVTGSGKTEVYFEAVAA
ALKDGGQALVMMPEIALTAQFLERFAARFGEKPAEWHSGVSERKRARIWRAAATGELSVV
AGARSALFLPFRDLRLIVVDEEHEGAYKQDDGASYHARDMAVVRARIENAAIVLASATPS
IETRVNAERGRYGHLRLHARAGSRAMPLLEPIDMRVQGAERGRWIAPRLALAIGETIARG
EQALLFLNRRGYAPLTLCRDCGHRFRCTQCDAWLVEHRFRRALVCHHCGHTERRPDTCPE
CGAEDSLTACGPGVERLAEEAATLFPDARILVLSSDFPGGAERLRRELDEIAKGAFDIVI
GTQLVAKGHNFPHLTLVGVIDADLGLGSGDPRSAERTFQLLNQVTGRAGRGDKPGRALIQ
TFQPEHPVITALLSGDAEKFYAQEIALRERAGLPPFGRLAALIVSGKDAATAEAHARALA
RAAHELPASPRYRVAALGGLPEADEIMMLGPAEAPIALIRGRFRYRLLVKAPRSADVQCF
LRDLIATAPKERGGVRVQIDVDPQSFM
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcgcaggatcattcgaaaagggcccataccgtcgacgtgctggcgccggtc
gccgtcgacacgacctattcctacctcgccccgcccgccctcggcttgcagccgggcgac
agcgtgcaagttccactcggagcccgcgaggcctatggggtcgtctggtccgtcgacgac
gcggaacggccgcgcggcaatctcaagaccgtcatcacgcgcctcgaccggccgccgctc
tcgcagaaactgcgcgatttcatcgactggctcgcgcgctacacgttgacgccgcgcggc
atggcgctgcgcctcgcaacccgcgccgcagaggaagccgcgcccgatacgttgcgcacg
ctctatcgcgcgggcgggaaaaagcccgagcgcctcacgcccacacgcgcgcgtgtgttg
gaagctgcccaaggcggcatggccttctccaagaaagcgctcgccgaagccgccgcctgc
tcgacgggcgtgatcgacgggctcgtcgacgaaggcgcattagagacaatcgcagcgccg
ccggaacccgtcgcgcgcgcgctcgaccccgatttcgctgcgcccttactcgagcccgcg
caacgcgaagcggcagacgcattgaccgacgccgtgcgcgcgcgcgcgttcaaacccttt
ttgctcgaaggcgtcaccggctccggcaaaaccgaagtctatttcgaggccgtcgcggcg
gcgttgaaggacggcggccaggccctcgtgatgatgccggagattgcgctcacggcgcaa
tttctcgagcgcttcgcggcgcgctttggcgagaagccggcggaatggcactcgggcgtc
tccgagcgcaaacgcgcgcgtatctggcgcgccgccgccacaggggagttgagcgtcgtc
gcgggcgcgcgctcggcgttattcctccccttccgtgaccttcgcctcatcgtcgtcgac
gaagaacatgagggcgcttacaaacaggacgacggcgcctcttatcacgcgcgcgacatg
gcggtggtgcgcgcgcgtatcgagaacgcagcgatcgtgctcgcttccgcgacgccctcg
atcgaaacgcgcgtcaacgccgaacgcggacgctacggccatttgcgcctgcatgcgcgc
gccggctctcgcgccatgccgctgctcgagccgatcgacatgcgcgtccagggcgcagaa
cgcggacgctggattgcgccgcggcttgcgctcgccatcggcgaaaccatcgcgcgcggc
gaacaggcgctgctctttctcaatcgtcgcggctatgcgcctttgacgctctgtcgtgat
tgcggccatcgcttccgctgcacgcaatgcgacgcctggcttgtcgaacatcgcttccgt
cgcgcgctcgtctgccatcactgcggccatacggagcggcgccctgacacatgcccggaa
tgcggcgccgaagattcgctgactgcttgcggccccggcgtcgagcgcctcgccgaagaa
gccgcaacgctctttcccgacgcgcgcattctcgtgctctcgtctgacttccccggcggc
gccgagaggttgcgacgcgagctcgatgaaatcgccaaaggcgctttcgacattgtcatc
ggcacgcagctcgtcgccaagggtcacaactttccgcatctcactttggtgggcgtcatc
gatgcggatttggggctcggcagcggcgatccgcgttcggccgagcgcacctttcaattg
ctcaatcaagtgaccggacgcgccgggcgcggcgacaagccgggacgcgcgctcattcaa
acattccagcccgagcatcccgtgattactgcgctgctctcgggcgacgcggagaaattc
tacgcgcaggaaatcgcgctgcgcgaacgcgccggactgccgcccttcgggcgccttgcg
gcgctcatcgtctccggcaaggacgctgccacggcggaagcgcatgcgcgcgccttggcg
cgcgccgcgcatgaattgccggcgtctccgcgctatcgcgtcgccgcgctcggcggtctg
ccggaggccgatgaaatcatgatgctcggcccggccgaggcgccgatcgcgctcattcgc
ggccgctttcgctaccgcctgctcgtgaaggcgccgcgcagcgccgatgtgcaatgcttc
ctgcgcgatctcattgcaacggcgccgaaagagcgcggcggcgtgcgtgtgcagatcgac
gtcgatccgcagagttttatgtga
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