Methylocystis sp. MJC1: OGR47_14845
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Entry
OGR47_14845 CDS
T11178
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
memc Methylocystis sp. MJC1
Pathway
memc03030
DNA replication
memc03410
Base excision repair
memc03420
Nucleotide excision repair
memc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OGR47_14845 (polA)
03410 Base excision repair
OGR47_14845 (polA)
03420 Nucleotide excision repair
OGR47_14845 (polA)
03440 Homologous recombination
OGR47_14845 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
memc03032
]
OGR47_14845 (polA)
03400 DNA repair and recombination proteins [BR:
memc03400
]
OGR47_14845 (polA)
Enzymes [BR:
memc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OGR47_14845 (polA)
DNA replication proteins [BR:
memc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OGR47_14845 (polA)
DNA repair and recombination proteins [BR:
memc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OGR47_14845 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OGR47_14845 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
UZX11148
LinkDB
All DBs
Position
3072284..3075289
Genome browser
AA seq
1001 aa
AA seq
DB search
MTLTHKPVGPGSHVFLVDGSSFVFRAYFQSIRQDAKYNYRSDRLPTGAVRLFCTKLLQFV
REGAAGATPTHLAIIFDKSENSFRKEIYPEYKAHRSEPPEDLVPQFPLMRAAVRAFGLTP
IEQDVYEADDLIATYAAQARKKGADVLIVSADKDLMQLIGPGVTMYDPASGAAGAKGSRE
ERLINEAEVIDYFGVTPDKVVDVQALAGDSTDNVPGAKGIGIKTAAQLINEYGDLDTLLE
NAPGIKQPKRREALTDPDAVNLIRLSKKLVELVRDAPVETKLDDLGLHQPDPKKLVAFLQ
AMEFTTITRRVGELYGVDIHEVEPDPHFVGPAGWRARNGEVDHAAAPAAPKPKEARTPAA
EKGTEGFSPATLVGARKAAALAEKIDRSTYETVMSVERLEQWVTDAFEAGIVALDTETTS
LDPLSCDLVGVSLALGPGRACYIPLQHREGGNGDLFGGADLVAGQIPLETAIEKLKPLFE
DDAVLKVAQNMKYDLLVLSRYGIDVAPMDDTMLISYALDTGRNNHGLDELAQKHLGHENI
TFAQVAGSGRNFIGFARVPLDKAMEYAAEDADVSLRLWRALKPRLAAEGKAAVYETLERP
MVTTLAHMERRGITIDRHMLSRLSGEFAQDMARLEADIFDLAGESFNLGSPKQLGDILFG
KMGLPGAKKTATGAWSTSASVLEDLAVEGNEFCRRILDWRQLSKLKSTYADALPGFVNKE
TGRVHTCYSLASTTTGRLSSSEPNLQNIPVRNEAGRKIRKAFVASPGHVLISADYSQIEL
RLLAHIADIPQLKKAFADGVDIHAMTASEMFGVPVKDMPPEVRRRAKAINFGIIYGISAF
GLANQLSIPREEAGAYIKRYFERFPGIRDYMDATKKTVREKMCVTTIFGRALHFPRIASA
NASDRAFYERAAINAPIQGAAADIIRRAMVRMDAALVEADLSAQMLLQVHDELVFEAPQA
EAEATIALARRVMEEAPLPAVALTVPLQVDARAAKNWDEAH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgactctcacgcacaagcccgtcggcccaggctctcacgtcttcctcgtcgacggctcc
tccttcgtctttcgcgcctatttccagtcgatccggcaggacgcgaaatacaactaccgc
tccgaccggctgccgaccggcgcggtgcggctcttttgcaccaagctcctgcaattcgtg
cgcgagggagcggcgggcgcgacacccacccatctcgccatcatcttcgacaagagcgag
aacagcttccgcaaggaaatctatccagaatacaaagcgcatcgcagcgagccgccggaa
gacctcgtcccacagtttcccctgatgcgcgcagccgtgcgcgctttcggcctcacgccg
atcgagcaggacgtctacgaggccgacgatctcatcgccacctacgccgcgcaggcgcgc
aaaaagggcgcggatgtgctcatcgtctccgccgacaaggacctcatgcagctcatcggg
ccgggcgtgaccatgtacgacccggcctccggggcggcgggggccaaaggctcgcgtgaa
gaacggctgatcaatgaggcggaggtcatcgactattttggcgtgacgccggacaaggtg
gtcgacgtgcaggcgctcgccggcgattcgacggataatgtgcccggcgccaagggcatc
ggcatcaaaaccgccgcccagctcatcaatgaatatggcgatctcgacacgctgctggaa
aatgcgccgggcatcaagcagcccaagcgccgcgaggcgctgaccgaccccgatgcggtc
aatctcatccgtctgtccaagaagctcgtcgagctcgtgcgcgacgcgccggtggaaacg
aagctcgacgatctgggtctgcaccaacccgatccaaagaagctcgtggccttcctgcag
gcgatggagttcacgaccattacgcgtcgggtcggcgaactctatggcgtcgatattcac
gaggtcgaacccgatccgcattttgtcggccccgcgggctggcgcgcccgcaatggcgaa
gtcgatcatgccgcggcgccggcggcgccaaagccgaaggaggcgcgcacgcccgcagct
gagaaaggcacggaaggtttttcgcctgcaacgctcgtcggcgcccgcaaagcggcggcg
ctcgccgagaagatcgaccgctcgacctatgagacggtgatgtccgtcgagcggctcgaa
caatgggtcacagacgccttcgaggcggggatcgtcgcgctcgacacggagaccacctcg
ctcgatccgttgagctgcgacctcgtgggcgtgtcgctcgcgctcgggccgggtcgcgcc
tgctatattccgctgcagcaccgcgagggcggaaatggcgatctctttggcggcgccgac
ctcgtcgccggccagattccgcttgagaccgcaatcgaaaaactcaagccgctctttgag
gacgacgccgtgctcaaagtcgcgcagaatatgaaatatgatctgctcgtgctctcgcgc
tacggcatcgacgtcgcgccgatggacgacacgatgctgatctcctacgcgctggatacg
ggccgcaacaatcacgggctcgatgagctcgcgcaaaaacatcttggacacgagaacatc
actttcgcacaggttgcgggctcaggccgtaatttcatcggcttcgcgcgcgttcccctc
gataaagcgatggaatatgcagccgaggacgccgatgtctcgctgcgcctgtggcgcgcg
ctgaaaccgcgtctcgccgccgaaggaaaggccgccgtctatgagacgctggagcgcccc
atggtcacgacgctggcgcatatggagcggcgcggcatcaccatcgaccggcatatgctc
tcgcgcctctcgggcgaatttgcgcaggacatggcgcggctggaggcggatattttcgat
ctcgccggcgagagcttcaatctcggctctcccaagcaattgggggacattctcttcggc
aagatgggcctgcccggcgccaagaagacagcgacgggcgcctggtcgacctccgccagc
gtgctcgaagatctcgcagtggaaggcaacgaattctgccgccgcattctcgactggcgc
cagctctccaagctcaaaagcacttacgccgacgcgctgccgggcttcgtgaacaaggaa
accggccgcgtccatacttgctattcgctcgcctcgacgacgacggggcggctttcgtcg
tccgagcccaatctgcaaaacattcccgtgcgcaacgaggccggccgcaagatccgcaaa
gccttcgtcgcctcgccgggccatgtgctgatttcggccgactattcgcagatcgagctg
aggctgctcgcgcatatcgccgacattccccaactgaaaaaggccttcgccgacggcgtc
gacatccacgccatgacggcctcggaaatgttcggcgtgccggtgaaggatatgccgccg
gaagtgcgccgccgcgccaaggcgatcaatttcggcatcatctacggcatttcggccttc
ggcctggccaatcagctctccatcccgcgcgaggaagcgggggcctatatcaagcgctat
ttcgaacgcttccccggcatccgcgactatatggacgccaccaaaaagaccgtgcgcgag
aagatgtgcgtgacgaccattttcggccgcgcgctgcatttcccccgcattgcttcggcc
aatgcgtccgaccgcgccttttacgaacgcgccgcgatcaacgcgccgatacagggcgcc
gccgccgacattatccgccgcgccatggtgcgcatggacgccgcgctggtcgaagcggat
ttgtcggcgcagatgctgttgcaggtgcacgacgagctcgtcttcgaggcgccgcaggcc
gaggctgaggcgacaatcgcactcgcccgtcgcgtgatggaggaagcgcccctccctgcc
gtcgcgcttaccgttccgctacaggtcgacgctcgtgcggccaagaactgggacgaggcc
cattag
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