Methylocystis sp. MJC1: OGR47_16935
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Entry
OGR47_16935 CDS
T11178
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
memc Methylocystis sp. MJC1
Pathway
memc00260
Glycine, serine and threonine metabolism
memc00460
Cyanoamino acid metabolism
memc00630
Glyoxylate and dicarboxylate metabolism
memc00670
One carbon pool by folate
memc00680
Methane metabolism
memc01100
Metabolic pathways
memc01110
Biosynthesis of secondary metabolites
memc01120
Microbial metabolism in diverse environments
memc01200
Carbon metabolism
memc01230
Biosynthesis of amino acids
memc01240
Biosynthesis of cofactors
memc04981
Folate transport and metabolism
Module
memc_M00140
C1-unit interconversion, prokaryotes
memc_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OGR47_16935
09102 Energy metabolism
00680 Methane metabolism
OGR47_16935
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OGR47_16935
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
OGR47_16935
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OGR47_16935
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
OGR47_16935
Enzymes [BR:
memc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
OGR47_16935
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UZX11533
LinkDB
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Position
complement(3507649..3508908)
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AA seq
419 aa
AA seq
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MPQPPSGYFTRGLEADPELEAAITGELMRQRDGIELIASENIVSRLVLAAQGSVLTNKTV
EGAAYARYYGGAEFVDAIEALAIDRAKKLFNCRFANVQPHSGSNANAGVFLGLLKLGEPI
LSMNVAAGGHISHGHSATLTGRDYSITQYGVNRESELIDLDELRDLARAARPKLIVAGGS
AYPRAIDFAGLRAIADEVGAYLLVDMAHVAGLVACGLYPHPFPHAHVVTTTTYKSLRGAR
GGMVLWNDEALAKRIDAGIFPGVQGSVMLHAVAGKAACLGEALQPAFRAYNEAVLENARA
LAAALVGAGLRVVTGGTDTGLMLVDLSPTGVTGDVAAKALEKAGLAVNKNMIPFDPRPPE
APSGLRLSSNAGTTRGFGVAEFQRIGAWIARVLRNPADLRTIDVARQEVLALCRAFPIY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccccagccgccctcaggctatttcacgcgcggcctcgaagccgacccggaactcgaa
gccgcgatcaccggcgagctcatgcgccagcgcgacgggatcgagctgatcgcctccgaa
aacatcgtctcgcgtctcgtgctcgccgcgcagggctccgtcctcaccaacaagaccgtc
gagggcgcggcctacgcccgctattacggcggggcggaattcgtcgacgccatcgaggcg
ctcgccatcgaccgcgcgaaaaagctgttcaactgccgtttcgccaatgtgcagccgcat
tcgggctccaacgccaatgccggcgtgtttctcggcctgttgaagctcggcgagcccatc
ctctccatgaatgtcgcggcgggcgggcatatcagccatggccactccgcgacgctgacc
gggcgcgactattcgatcacgcaatatggcgtgaatcgcgagagcgagctgatcgacctc
gatgaattgcgcgacctcgcgcgcgcggcgcggccgaaattgatcgtcgcgggcggctcg
gcctatccgcgcgcgatcgactttgcagggctgcgcgccatcgccgatgaggtcggcgcc
tatcttctcgtcgatatggcgcatgtcgccgggctcgtggcttgcgggctttatccgcac
ccctttccgcatgcgcatgtggtgacgacgacgacctataaatccttgcgcggcgcgcgc
ggcggcatggttttgtggaatgacgaagcgctcgccaagcgcatcgacgccggcatattt
cccggcgtgcagggctctgtcatgctgcacgccgtggcgggcaaggcggcgtgtttgggc
gaggcgctgcagccggcgtttcgcgcctataatgaagccgtgctcgaaaacgcccgcgcg
cttgccgcggcgctcgtcggcgcgggcctgcgcgtcgtgaccggcgggaccgataccggg
ctcatgctcgtcgatctctcgccaacgggcgtgaccggcgacgtcgcggccaaggcgctg
gagaaggcggggctcgcggtgaacaagaatatgatccccttcgatccgcgcccgccggag
gcgccctcgggcctgcggctctcgagcaacgccgggacgacgcgcggcttcggggttgcg
gaattccagcgcatcggcgcgtggattgcccgtgtcttacgcaatccggccgatcttcgt
acaatcgacgtggcgcgccaggaagtgctggcgctgtgccgggcttttcctatttactag
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