Methylocystis sp. MJC1: OGR47_20165
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Entry
OGR47_20165 CDS
T11178
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
memc Methylocystis sp. MJC1
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
memc03021
]
OGR47_20165 (rpoH)
Transcription machinery [BR:
memc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OGR47_20165 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_11
Sigma70_r4_2
HTH_19
GntR
MRP-L47
Motif
Other DBs
NCBI-ProteinID:
UZX14099
LinkDB
All DBs
Position
unnamed1:291663..292625
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AA seq
320 aa
AA seq
DB search
MPTTLTMLSPESRLIRYLSRIRQFPMLELLEEQMLARRWREHGDSQAACELITSHLRLVV
KIAMGYRGYGLPVGDLISEGNLGLMQAVKRFEPDRGFRLSTYARWWIRASIQEYVLRSWS
LVRMGSSANMKKLFFNLRHAKNRLSAYEEGDLKPENVAMMALLLGVRQKDVIAMNRRMGS
DASLNTPIGEKGETGGEWLDWFVDDSDDQEQVLVGDEEYDNRQMSLRNALDVLNPRERRI
LEARRLTDTPVTLTTLAAEFGVSRERVRQIEVRAFGKVQREVRAGGAHIEERAADLHAMG
LLIIQDAQAEHKGTQSRLRH
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgccgactaccctgaccatgctctcccccgaaagcagacttatccgttatctatctcga
atccgccagtttcccatgctggagttgctggaggaacagatgttagcgcgacggtggcgt
gagcacggggattcacaggccgcgtgcgagctcataacctcgcatctacgcctcgtcgtc
aaaatcgccatgggttatcgtggctatggtctccccgtcggcgaccttatctcagagggc
aatctcggactcatgcaagccgtcaagcgtttcgaaccagatcgtggcttccgcctctca
acttacgcgaggtggtggattcgggcgtcgattcaagaatacgttctaaggtcctggtct
ctggtgaggatgggctcaagcgcgaacatgaagaagctattcttcaacctccgtcacgcc
aagaaccgcctttcggcttatgaggaaggcgacctcaagccagaaaatgtcgcaatgatg
gccctcctccttggcgttcgccagaaggacgtcatagcgatgaaccgtcgtatgggtagc
gacgcctcgctcaatacgccgattggcgaaaaaggcgagacaggtggcgaatggctagat
tggttcgtcgacgacagtgacgatcaggagcaggttcttgtcggcgacgaagaatacgac
aatcgacagatgtcattgcggaacgcgcttgacgtgctgaatccgcgggagcgtcgaatt
ctggaggcccgccgcctcacagatactcccgtgacgctcacgactctagccgccgaattt
ggcgtgtcgcgcgagcgtgtgcgccagatcgaggtgcgcgccttcggaaaggttcagcgg
gaggttcgcgctggcggcgcgcacatcgaggagcgggccgccgatctgcatgcaatggga
ttgcttatcatccaagatgcacaggcggagcacaaggggacccaaagtcggcttcgccat
tag
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