Methanobacterium alkalithermotolerans: HYG87_00105
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Entry
HYG87_00105 CDS
T07794
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
meme
Methanobacterium alkalithermotolerans
Brite
KEGG Orthology (KO) [BR:
meme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meme03016
]
HYG87_00105 (endA)
Enzymes [BR:
meme01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HYG87_00105 (endA)
Transfer RNA biogenesis [BR:
meme03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HYG87_00105 (endA)
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Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
QUH22279
UniProt:
A0A8T8K309
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All DBs
Position
complement(13867..14370)
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AA seq
167 aa
AA seq
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MRSELSNDLVTVISPKAEKLNQKSHYGRMENEQLELSLIEALYLLDKEKISIFSKDKELS
REEMTGIIKDKDLYSKYLVFKDLRNRGYIVKTGFKYGSEFRLYERGKSPGEGHSDYLVNV
ISENYDLNVLDFSSYVRVAHGVNKKLLMAVVDEEGDITYYNVEWIRP
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcagagttatcaaatgatctggttacagtaataagtcctaaagcagagaaatta
aatcaaaaaagccattacgggcgtatggaaaatgaacaattggaattatccctgattgaa
gctctctatcttttggataaagaaaaaatttccatattttctaaggataaagaactatcc
cgggaagagatgaccggcatcatcaaagataaggatttatacagcaaatacctggtattt
aaagaccttcgaaacagaggatatatagtcaaaactggttttaagtacggatcagaattc
agactttatgaaagaggaaaatctcccggtgaaggtcactccgattatctggttaatgta
atatcagaaaattatgatttaaatgttctggatttttccagctatgtaagggtagcccat
ggtgttaataaaaaactattaatggctgtggttgatgaagaaggagacatcacctattat
aatgtggaatggatccggccctag
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