Methanobacterium alkalithermotolerans: HYG87_03720
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Entry
HYG87_03720 CDS
T07794
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
meme
Methanobacterium alkalithermotolerans
Pathway
meme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HYG87_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meme03021
]
HYG87_03720
Transcription machinery [BR:
meme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HYG87_03720
Prokaryotic type
Archaeal type
TFB
HYG87_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_Tnp_ISL3
Ribosomal_S27e
Lar_restr_allev
BRF2-like_C_cyclin_rpt
Cyclin_C
UPF0181
Cas_Cas5d
Zn_ribbon_8
Zn_ribbon_LysW
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
QUH22941
UniProt:
A0A8T8KC42
LinkDB
All DBs
Position
complement(786178..787110)
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AA seq
310 aa
AA seq
DB search
MKNDVSETEKETKCPECGSEDLIGDYERAEIVCGGCGLVIDDNLVDMGPEWRAFDHEQRD
KRTRVGAPITYTIHDKGLSTMIDWRNKDIYGRDIPARNRAQWYRLRKWQRKIRISGATER
NLAFALSELDRDSSRLGLPRSVREAASVVYRSAVENKLIRGRSIEGVVAASLYAACRRCN
VPRTLDEIAEVSRVSKKEVGRTYRFLTRELNIKLPPTSPVDYVPRFASELGLSGEVQSKA
IEIIEKAMEKGLTSGRGPTGVAAAALYIASVLLGERKTQRDVADIAGVTEVTIRNRYKEL
TEQLDMGVTL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgatgtttctgaaacagaaaaggaaacaaaatgtccagaatgtggatctgaa
gatctgattggagattacgaaagagcagagatagtctgtggaggatgcggcctggttata
gatgataacctggtggatatgggtccggaatggagagcattcgatcacgaacaaagagac
aaaagaaccagagtaggagcacctataacctataccattcacgataagggtctttccacc
atgattgattggagaaacaaggatatttatggacgtgatattcctgctcgaaacagagcc
caatggtaccgtcttcggaaatggcagaggaaaataagaatttccggcgctactgagaga
aacctggcctttgcactcagtgaacttgatagggattcttcccgtctgggactcccacga
agtgtgagagaagctgcctcagtggtctatcgtagtgcagtggaaaataaactaatccgg
ggaagaagtatcgaaggagtggtagctgcatcactttacgccgcctgcaggagatgtaat
gtgccccgtacactggatgaaatagcagaggtctccagggtgagtaaaaaagaagttgga
aggacctaccggtttttaaccagggaacttaacatcaaattaccaccaacctctcccgtg
gattatgtacctcgttttgccagtgaattaggattatctggggaagtacaatctaaagca
attgaaatcattgaaaaggctatggaaaaaggtcttacttctggaagaggccctacgggt
gtagctgctgccgcactatatattgcctcagttctcttaggagaaagaaaaactcaaaga
gatgtggcagatattgccggtgtaaccgaggttaccatccgaaaccgttacaaagaacta
acagaacaactggatatgggtgtaactttataa
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