KEGG   Methanobacterium alkalithermotolerans: HYG87_07255
Entry
HYG87_07255       CDS       T07794                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
meme  Methanobacterium alkalithermotolerans
Pathway
meme03030  DNA replication
meme03410  Base excision repair
meme03420  Nucleotide excision repair
meme03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:meme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HYG87_07255
   03410 Base excision repair
    HYG87_07255
   03420 Nucleotide excision repair
    HYG87_07255
   03430 Mismatch repair
    HYG87_07255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meme03032]
    HYG87_07255
   03400 DNA repair and recombination proteins [BR:meme03400]
    HYG87_07255
Enzymes [BR:meme01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HYG87_07255
    6.5.1.6  DNA ligase (ATP or NAD+)
     HYG87_07255
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     HYG87_07255
DNA replication proteins [BR:meme03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HYG87_07255
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HYG87_07255
DNA repair and recombination proteins [BR:meme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HYG87_07255
   NER (nucleotide excision repair)
    Other NER factors
     HYG87_07255
   MMR (mismatch excision repair)
    Other MMR factors
     HYG87_07255
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QUH24333
UniProt: A0A8T8KB78
LinkDB
Position
1477352..1479007
AA seq 551 aa
MRYKVLVDVYEALDATTKRLEKTDILADFFSRVETGLLPVVTIMALGKVFPVWSEKELGI
GSKLLMKAIALAVGVTTLEVEDQIRDQGDIGSATEILYKKRSQTTFFSKPLTIEMVYTNL
RKLANISGNKAQSRKIDIILELLSLASPQEAKYITRTVLEELRVGVGEGTIRDSISQAFG
VDKKLLERAHMLTNDLGMVAKVAHAEGEKGLQSLSLKPGKPVKPMLAQLADGIKETVLEM
GRIYCETKYDGIRVQIHRKDSQIMIFTRRLENISNALPDVIQYIEKALPPQDFIVEGEII
VTKQGKPISFQYILQRVRRKYDIEKVMESVPLTLYLFDVLYYQEPLIDAPLEIRRETLEK
IAKTMDNQVELSKQVKVSGDNIEDAENLFKESIELGHEGIMLKDPQAPYIPGIRGKKMLK
YKAEPESLDLVVVGGTYGKGKRAHGIGSYLLALNDDDGELKTIAHVATGLDENTLLELSN
RMEELAIERRGRQIKVKPHIILEISYSEIVKSPEYESGYSLRFPVVKRIRDDLSIEDIDT
VARVNSMFKRP
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgagatataaagtgctggtagatgtatatgaagctctggatgctaccactaaaagattg
gaaaaaaccgatattttggcggatttcttttccagggttgaaacaggtttactgccagta
gtaaccatcatggcactgggaaaggttttcccggtttggagtgagaaggagctgggtatt
ggttctaaattacttatgaaagccatagctctggcagtgggggttacaacattggaagta
gaggaccagatacgggatcagggagatataggatctgccactgaaatattatataaaaaa
agatctcagaccacctttttttcaaagcccctgaccatagaaatggtttatactaattta
aggaaattagccaatatttctggaaataaagcgcaatcacgtaaaattgatattatcctg
gaattattgtcactggcatcgcctcaggaagcaaaatacattactcgcactgttctggaa
gaattaagggtgggggtaggcgaaggaactatccgggattctatttcacaggcatttggg
gttgataaaaaactcctggaaagagcccacatgctaaccaatgatctgggtatggtggct
aaagtggcccatgctgaaggggaaaaaggactccaatcactatctctaaaacctggaaaa
ccagttaagccgatgttagctcaattagctgacggaattaaggaaacggtattggaaatg
gggcgtatctattgtgaaactaaatatgatggtatacgtgtacaaattcaccgcaaggac
tctcaaataatgattttcacccgcagactggagaatattagcaatgccctgccggatgtt
atccagtacatagaaaaagcccttcctcctcaggattttatagtagaaggggaaataatc
gttaccaagcagggaaaacctatttcctttcaatatattctccagagagtgcgccgtaaa
tatgatattgagaaagtaatggaaagtgttccccttaccctgtatctttttgatgtttta
tattaccaagaacctttaattgacgctcccctggaaataagaagagaaactctggaaaaa
atcgctaaaaccatggataatcaggtggaactctccaaacaggtaaaagtatccggggat
aatattgaagatgcagaaaacctttttaaagaatctattgaattaggccatgagggtata
atgctcaaggatccccaggcaccatacatccccggcatcaggggtaagaaaatgcttaaa
tataaggctgaaccagaatccctggatctggtagtggtgggaggtacctatggtaaaggt
aagagagcgcacgggataggttcctatttactggccttaaatgatgatgatggtgaatta
aaaaccattgctcatgtggccactggcctggatgaaaataccctcctggaactatcaaat
cgaatggaagaactggccatagaaagaaggggaaggcagattaaagtaaaaccccatatt
atcctggaaatttcatatagtgagattgtcaaaagcccggaatatgagagtggatactca
ctccgctttccggtggttaaaagaatcagggatgatctcagtatagaagatattgatacg
gtggcccgggtaaattccatgttcaagaggccctga

DBGET integrated database retrieval system