KEGG   Methanobacterium alkalithermotolerans: HYG87_08485
Entry
HYG87_08485       CDS       T07794                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
meme  Methanobacterium alkalithermotolerans
Brite
KEGG Orthology (KO) [BR:meme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meme03400]
    HYG87_08485
Enzymes [BR:meme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HYG87_08485
    5.6.2.6  RNA 3'-5' helicase
     HYG87_08485
DNA repair and recombination proteins [BR:meme03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HYG87_08485
SSDB
Motif
Pfam: DEAD_assoc DEAD WH_Lhr Helicase_C ResIII Cas3-like_C_2 nSTAND3 PhoH PAC4 AAA_19 Ubiq_cyt_C_chap DUF1424
Other DBs
NCBI-ProteinID: QUH23793
UniProt: A0A8T8K9L6
LinkDB
Position
complement(1727543..1730122)
AA seq 859 aa
MIQKQDRIYTSKEIFTNLHPWVSKWFKGKFETFTPAQKYAIMDIHQNKNVLISSPTGSGK
TLTAFLSIISELTSLAQKEELEDKVYCIYISPLKALDNDIEKNLEEPLREIEQIAGKDLG
IRKAVRTGDTPQSKRAAMLKKPPHILITTPETLSILLVAPKFREKLSHVKYVIVDEIHSL
AENKRGVHLSLSLERLQHLIGNFTRIGLSATVHPLDKVARFLVGYEYGQVRDCLIVDINY
LKQLDMEVICPVDDIVAADPDKTNTAMYHLLDDLINQHKTTLIFTNTRSGTESIVYNLKK
RFKENYNQENIMAHHSSLSKEIRLETENNLKEGKLKVVVSSTSLELGIDIGYIDLVILVS
SPKSVSRALQRIGRSGHQLHEKSKGRMLVVDRDDLVECSVILKNALEGKIDSINIPTNCL
DVLSQHIYGMAIENKWDIDYAYEVIKKSFCYHQLSKTDYLSVLSYMAGEYTSLEDRYVYA
KIWVDYKKNMFGKRGRLARMLYSTNIGTIPDRSGAVVKCAGKVVGRIEEDFMEKLRKGDS
FVLGGNIYRFNYARGMSVNVSHASGPPTIPSWFSEQLPLSFDLAVDIQRFRDIMDSKLSY
GRSKEEILEFIHDYLYVDYNAAHSIFQYFQEQYLFSHIPSNRRLLVEYYTGFGGRKFVVF
HTLFGRRVNDALSRALAYIIAKKFKRDVMISVSDNGFYLSSDGKIGGLEAFKDLNSENLV
DILIKAIDKTETLASRFRHCAGRSLMILRRYKGQEKSVGRQQVKGKILLKFVQELDENFS
ILKEARREVIEDYMDVKNAQRVLEWIESNQMEIKQFNTKIPSPFAFNLVAQGYLDVLKYE
ERIEFIKRMHEAIVREING
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgatacaaaaacaggaccggatatacacttctaaggagatttttactaatttacatccc
tgggttagtaaatggtttaaaggaaagtttgaaacatttacccctgcccagaaatacgcc
atcatggatattcatcagaacaagaatgtgctgatttcatcccccactggttcaggaaaa
actctaacagcctttttatccattataagtgaattaacctctttagcccaaaaagaagaa
ttagaggataaagtttactgtatttacatttcacctttaaaggccctggataatgatata
gaaaaaaatttagaggaacccttaagggaaatagagcaaatagcaggaaaagatctggga
atacgaaaagcagttcgtaccggggacacccctcaatctaaacgtgccgccatgctcaaa
aaaccaccccacatccttataaccacccctgaaacactatccatccttctggtggcacct
aaatttagagaaaaattatcacatgttaaatatgtaattgtggatgaaatacactccctt
gcagaaaataaaagaggagtacatctttctttaagtttggaaagattacagcatctcatt
ggtaatttcacccgtattggtttatcagccaccgttcaccccctggataaagtagcccgg
tttctggtaggatatgaatacggccaggtaagagactgtttgatagtggatattaactat
cttaaacaactggatatggaagttatctgtccggtggatgatattgttgctgctgatccg
gacaaaaccaataccgccatgtaccacctgctggatgatttaattaaccagcataagacc
acactaatattcaccaacacccgtagtgggactgaaagtattgtttataatcttaaaaaa
cgttttaaggagaattataaccaggaaaacatcatggcccatcattcttccctttctaaa
gaaatacgcttagaaacagaaaataatttgaaagaagggaagttgaaagtggtggtttct
tccacttcactggaactgggtattgatataggatatattgacctggtgatactggtgagt
tcccctaaatctgtttcccgggccctgcaacgtattggccgcagtggccatcagttgcat
gaaaaatctaaaggtcggatgctggtggtggatcgggatgatctggtggagtgttcggtg
attttaaaaaatgcactggaaggaaagattgactccataaacatacctactaattgtctg
gatgtcttatcccagcatatctatggtatggccatagaaaataaatgggatattgattat
gcctatgaagttataaaaaagagtttctgctaccatcaactttctaaaacagattattta
agtgttttaagttatatggctggagaatataccagtttagaggataggtatgtttatgcc
aaaatatgggtggattataaaaagaacatgtttggaaaaaggggaagattggcccgaatg
ctttattccaccaatattggtactataccggaccgcagtggagccgtggtaaaatgtgcc
ggtaaagtggtgggacggatagaggaagattttatggaaaaactccgtaaaggagatagc
ttcgttttaggaggaaatatttaccggttcaattatgcccgggggatgagtgtaaatgta
agtcatgcttccgggccccctaccattccttcctggttttctgagcagttacccctatcc
tttgatctggccgttgatattcaacgtttcagggatataatggatagtaaactaagttat
ggccggagtaaagaagaaattctggaatttatacacgattatttatatgtggattacaat
gccgcccactctatcttccagtatttccaggaacagtacctctttagccatattcccagt
aaccggcgtcttctggtagaatactatactggttttggtggtagaaagtttgtggttttc
cacaccttatttggaagaagggttaatgatgccctatcccgggccctggcctatattatt
gctaaaaaatttaaaagagatgtgatgatttctgtatcagataatggattctatttaagt
tctgatgggaaaattggtggtttggaagctttcaaagatttaaattctgagaacctggtg
gatattctaattaaagccatagataaaacagaaactctggccagccggtttcgtcactgc
gccggaaggtctttaatgatactgcgtcgttataagggccaggaaaaatcagtgggacgc
cagcaggttaaagggaaaatattgcttaaatttgtacaggaacttgatgagaatttttct
atcctgaaagaagcccgaagggaagtaattgaagattacatggatgttaaaaatgcccag
agagttttagaatggatagaaagtaatcaaatggaaataaaacagttcaatactaaaatt
ccatctccttttgcatttaatctagtagctcagggatatctggatgttttaaagtatgaa
gaaaggatagagtttataaaaaggatgcatgaggccattgtaagggaaattaatggatga

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